Searching in Shewanella loihica PV-4 (PV4)
Found 6 curated entries in PaperBLAST's database that match 'carbamoyl-phosphate synthase%small' as complete word(s).
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Shewanella loihica PV-4, or try another query
| Shew_2839: carbamoyl phosphate synthase small subunit (RefSeq) is similar to: | PaperBLAST |
CARA_ECOLI / P0A6F1: Carbamoyl-phosphate synthase small chain; Carbamoyl-phosphate synthetase glutamine chain; EC 6.3.5.5 from Escherichia coli | 78% id, 100% cov |
CARA_ARATH / Q9LVW7: Carbamoyl-phosphate synthase small chain, chloroplastic; Carbamoyl-phosphate synthetase glutamine chain; Protein VENOSA 6; EC 6.3.5.5 from Arabidopsis thaliana | 47% id, 87% cov |
CARA_YEAST / P07258: Carbamoyl-phosphate synthase arginine-specific small chain; CPS-A; Arginine-specific carbamoyl-phosphate synthetase, glutamine chain; EC 6.3.5.5 from Saccharomyces cerevisiae | 41% id, 90% cov |
| Shew_0575: glutamine amidotransferase of anthranilate synthase (RefSeq) is similar to: | PaperBLAST |
carA / CAA68238.2: carbamoyl-phosphate synthase small subunit from Lactobacillus plantarum | 29% id, 42% cov |
CARA_BACSU / P25993: Carbamoyl-phosphate synthase pyrimidine-specific small chain; Carbamoyl-phosphate synthetase glutamine chain; EC 6.3.5.5 from Bacillus subtilis | 30% id, 38% cov |
CARA_ECOLI / P0A6F1: Carbamoyl-phosphate synthase small chain; Carbamoyl-phosphate synthetase glutamine chain; EC 6.3.5.5 from Escherichia coli | 28% id, 35% cov |
| Shew_2252: anthranilate synthase component II (RefSeq) is similar to: | PaperBLAST |
CARA_BACSU / P25993: Carbamoyl-phosphate synthase pyrimidine-specific small chain; Carbamoyl-phosphate synthetase glutamine chain; EC 6.3.5.5 from Bacillus subtilis | 30% id, 36% cov |
CARA_ARATH / Q9LVW7: Carbamoyl-phosphate synthase small chain, chloroplastic; Carbamoyl-phosphate synthetase glutamine chain; Protein VENOSA 6; EC 6.3.5.5 from Arabidopsis thaliana | 25% id, 39% cov |
carA / CAA68238.2: carbamoyl-phosphate synthase small subunit from Lactobacillus plantarum | 27% id, 34% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory