Searching in Shewanella loihica PV-4 (PV4)
Found 2 curated entries in PaperBLAST's database that match 'carbamoyl-phosphate synthetase%large' as complete word(s).
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Shewanella loihica PV-4, or try another query
Shew_2838: carbamoyl phosphate synthase large subunit (RefSeq) is similar to: | PaperBLAST |
carB / P00968: carbamoyl-phosphate synthetase large subunit (EC 6.3.5.5) from Escherichia coli | 82% id, 100% cov |
pyrAB / P25994: pyrimidine-specific carbamoyl-phosphate synthetase (large subunit) (EC 6.3.5.5) from Bacillus subtilis | 50% id, 100% cov |
Shew_3218: carbamoyl-phosphate synthase L chain, ATP-binding (RefSeq) is similar to: | PaperBLAST |
pyrAB / P25994: pyrimidine-specific carbamoyl-phosphate synthetase (large subunit) (EC 6.3.5.5) from Bacillus subtilis | 23% id, 28% cov |
Shew_3365: acetyl-CoA carboxylase, biotin carboxylase (RefSeq) is similar to: | PaperBLAST |
pyrAB / P25994: pyrimidine-specific carbamoyl-phosphate synthetase (large subunit) (EC 6.3.5.5) from Bacillus subtilis | 22% id, 27% cov |
carB / P00968: carbamoyl-phosphate synthetase large subunit (EC 6.3.5.5) from Escherichia coli | 27% id, 17% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory