Searching in Shewanella loihica PV-4 (PV4)
Found 9 curated entries in PaperBLAST's database that match 'hisF' as complete word(s).
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Shewanella loihica PV-4, or try another query
| Shew_2203: imidazole glycerol phosphate synthase subunit HisF (RefSeq) is similar to: | PaperBLAST |
HIS6_ECOLI / P60664: Imidazole glycerol phosphate synthase subunit HisF; IGP synthase cyclase subunit; IGP synthase subunit HisF; ImGP synthase subunit HisF; IGPS subunit HisF; EC 4.3.2.10 from Escherichia coli | 75% id, 100% cov |
2a0nA / Q9X0C6: Crystal structure of imidazole glycerol phosphate synthase subunit hisf (ec 4.1.3.-) (Tm1036) from thermotoga maritima at 1.64 a resolution | 49% id, 100% cov |
HIS6_THEMA / Q9X0C6: Imidazole glycerol phosphate synthase subunit HisF; IGP synthase cyclase subunit; IGP synthase subunit HisF; ImGP synthase subunit HisF; IGPS subunit HisF; EC 4.3.2.10 from Thermotoga maritima | 49% id, 99% cov |
| Shew_2202: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (RefSeq) is similar to: | PaperBLAST |
1h5yA / Q8ZY16: Hisf protein from pyrobaculum aerophilum | 28% id, 87% cov |
1h5yB / Q8ZY16: Hisf protein from pyrobaculum aerophilum | 28% id, 87% cov |
2a0nA / Q9X0C6: Crystal structure of imidazole glycerol phosphate synthase subunit hisf (ec 4.1.3.-) (Tm1036) from thermotoga maritima at 1.64 a resolution | 26% id, 92% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory