Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)
Found 5 curated entries in PaperBLAST's database that match '1.1.1.122' as complete word(s).
These curated entries have 4 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query
| CA265_RS08565: oxidoreductase is similar to: | PaperBLAST |
SM_b21109: L-fucose dehydrogenase (EC 1.1.1.122) from Sinorhizobium meliloti | 47% id, 92% cov |
| CA265_RS01235: hypothetical protein is similar to: | PaperBLAST |
FCDH_PSESP / Q52472: D-threo-aldose 1-dehydrogenase; L-fucose dehydrogenase; EC 1.1.1.122 from Pseudomonas sp. | 29% id, 89% cov |
BPHYT_RS34225: L-fucose dehydrogenase (EC 1.1.1.122) from Burkholderia phytofirmans | 29% id, 85% cov |
| CA265_RS08030: NADPH:quinone reductase is similar to: | PaperBLAST |
Q97YM2: D-threo-aldose 1-dehydrogenase (EC 1.1.1.122) from Saccharolobus solfataricus | 22% id, 93% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory