Curated BLAST for Genomes

 

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 19 curated entries in PaperBLAST's database that match '1.1.1.18' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 14 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS15350: oxidoreductase
is similar to:
PaperBLAST

Q5KYQ3: inositol 2-dehydrogenase (EC 1.1.1.18) from Geobacillus kaustophilus

28% id,
95% cov

CA265_RS19285: oxidoreductase
is similar to:
PaperBLAST

Q9EZV8: inositol 2-dehydrogenase (EC 1.1.1.18) from Sinorhizobium fredii

24% id,
96% cov

Q5KYQ3: inositol 2-dehydrogenase (EC 1.1.1.18) from Geobacillus kaustophilus

23% id,
96% cov

E1U888: inositol 2-dehydrogenase (EC 1.1.1.18) from Lacticaseibacillus casei

27% id,
56% cov

More...

CA265_RS12480: oxidoreductase
is similar to:
PaperBLAST

IOLG_THEMA / Q9WYP5: Myo-inositol 2-dehydrogenase; EC 1.1.1.18 from Thermotoga maritima
iolG / Q9WYP5: myo-inositol 2-dehydrogenase (EC 1.1.1.18) from Thermotoga maritima

24% id,
94% cov

E1U888: inositol 2-dehydrogenase (EC 1.1.1.18) from Lacticaseibacillus casei

26% id,
85% cov

E1U887: inositol 2-dehydrogenase (EC 1.1.1.18) from Lacticaseibacillus casei

26% id,
73% cov

More...

CA265_RS14270: hyaluronate lyase
is similar to:
PaperBLAST

E1U888: inositol 2-dehydrogenase (EC 1.1.1.18) from Lacticaseibacillus casei

24% id,
93% cov

PS417_11875: Inositol 2-dehydrogenase (EC 1.1.1.18) from Pseudomonas simiae

23% id,
70% cov

AO356_23190: Inositol 2-dehydrogenase (EC 1.1.1.18) from Pseudomonas fluorescens

22% id,
54% cov

More...

CA265_RS23285: oxidoreductase
is similar to:
PaperBLAST

AO353_21365: Inositol 2-dehydrogenase (EC 1.1.1.18) from Pseudomonas fluorescens

24% id,
87% cov

HSERO_RS12095: Myo-inositol 2-dehydrogenase (EC 1.1.1.18) from Herbaspirillum seropedicae

21% id,
97% cov

PS417_11875: Inositol 2-dehydrogenase (EC 1.1.1.18) from Pseudomonas simiae

28% id,
54% cov

More...

CA265_RS23295: oxidoreductase
is similar to:
PaperBLAST

iolG / A0A0H3FQ94: myo-inositol 2-dehydrogenase (EC 1.1.1.18) from Klebsiella aerogenes

30% id,
56% cov

IOLG_THEMA / Q9WYP5: Myo-inositol 2-dehydrogenase; EC 1.1.1.18 from Thermotoga maritima
iolG / Q9WYP5: myo-inositol 2-dehydrogenase (EC 1.1.1.18) from Thermotoga maritima

27% id,
46% cov

E1U888: inositol 2-dehydrogenase (EC 1.1.1.18) from Lacticaseibacillus casei

24% id,
44% cov

More...

CA265_RS12040: hypothetical protein
is similar to:
PaperBLAST

IOLG_THEMA / Q9WYP5: Myo-inositol 2-dehydrogenase; EC 1.1.1.18 from Thermotoga maritima
iolG / Q9WYP5: myo-inositol 2-dehydrogenase (EC 1.1.1.18) from Thermotoga maritima

27% id,
57% cov

iolG / A0A0H3FQ94: myo-inositol 2-dehydrogenase (EC 1.1.1.18) from Klebsiella aerogenes

22% id,
69% cov

BWI76_RS03095: Inositol 2-dehydrogenase (EC 1.1.1.18) from Klebsiella michiganensis

21% id,
69% cov

More...

CA265_RS23300: oxidoreductase
is similar to:
PaperBLAST

E1U887: inositol 2-dehydrogenase (EC 1.1.1.18) from Lacticaseibacillus casei

28% id,
52% cov

Q5KYQ3: inositol 2-dehydrogenase (EC 1.1.1.18) from Geobacillus kaustophilus

26% id,
49% cov

CA265_RS22425: oxidoreductase
is similar to:
PaperBLAST

IOLG_THEMA / Q9WYP5: Myo-inositol 2-dehydrogenase; EC 1.1.1.18 from Thermotoga maritima
iolG / Q9WYP5: myo-inositol 2-dehydrogenase (EC 1.1.1.18) from Thermotoga maritima

23% id,
56% cov

CA265_RS14280: oxidoreductase
is similar to:
PaperBLAST

IOLG_BACSU / P26935: Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase; Myo-inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase; MI 2-dehydrogenase/DCI 3-dehydrogenase; EC 1.1.1.18; EC 1.1.1.369 from Bacillus subtilis
iolG / P26935: inositol 2-dehydrogenase monomer (EC 1.1.1.18; EC 1.1.1.369) from Bacillus subtilis
P26935: inositol 2-dehydrogenase (EC 1.1.1.18); D-chiro-inositol 1-dehydrogenase (EC 1.1.1.369) from Bacillus subtilis

23% id,
57% cov

CA265_RS08510: oxidoreductase
is similar to:
PaperBLAST

Q5KYQ3: inositol 2-dehydrogenase (EC 1.1.1.18) from Geobacillus kaustophilus

25% id,
52% cov

CA265_RS15365: oxidoreductase
is similar to:
PaperBLAST

IOLG_THEMA / Q9WYP5: Myo-inositol 2-dehydrogenase; EC 1.1.1.18 from Thermotoga maritima
iolG / Q9WYP5: myo-inositol 2-dehydrogenase (EC 1.1.1.18) from Thermotoga maritima

27% id,
46% cov

E1U888: inositol 2-dehydrogenase (EC 1.1.1.18) from Lacticaseibacillus casei

25% id,
44% cov

CA265_RS13400: oxidoreductase
is similar to:
PaperBLAST

E1U888: inositol 2-dehydrogenase (EC 1.1.1.18) from Lacticaseibacillus casei

24% id,
44% cov

Q5KYQ3: inositol 2-dehydrogenase (EC 1.1.1.18) from Geobacillus kaustophilus

31% id,
15% cov

CA265_RS05930: glycosyl hydrolase
is similar to:
PaperBLAST

Q5KYQ3: inositol 2-dehydrogenase (EC 1.1.1.18) from Geobacillus kaustophilus

25% id,
41% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 14 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory