Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)
Found 58 curated entries in PaperBLAST's database that match '1.1.1.25' as complete word(s).
These curated entries have 42 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query
| CA265_RS19745: shikimate dehydrogenase is similar to: | PaperBLAST |
CA265_RS19745: shikimate dehydrogenase (EC 1.1.1.25) from Pedobacter sp. | 100% id, 100% cov |
BT4215: shikimate dehydrogenase (EC 1.1.1.25) from Bacteroides thetaiotaomicron | 51% id, 100% cov |
AROE_AQUAE / O67049: Shikimate dehydrogenase (NADP(+)); SD; SDH; EC 1.1.1.25 from Aquifex aeolicus | 36% id, 91% cov |
| CA265_RS15965: glutamyl-tRNA reductase is similar to: | PaperBLAST |
Q88RQ5: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Pseudomonas putida | 32% id, 38% cov |
AROE_VIBCH / Q9KVT3: Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Vibrio cholerae | 33% id, 26% cov |
| CA265_RS11640: 3-phosphoshikimate 1-carboxyvinyltransferase is similar to: | PaperBLAST |
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans | 33% id, 27% cov |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 32% id, 28% cov |
Q6W3D0: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Toxoplasma gondii | 35% id, 1% cov |
| CA265_RS11615: 3-dehydroquinate synthase is similar to: | PaperBLAST |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 33% id, 22% cov |
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans | 36% id, 18% cov |
Q6W3D0: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Toxoplasma gondii | 50% id, 3% cov |
| CA265_RS04615: 3-dehydroquinate synthase is similar to: | PaperBLAST |
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans | 27% id, 17% cov |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 30% id, 12% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory