Curated BLAST for Genomes

 

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 30 curated entries in PaperBLAST's database that match '1.1.1.307' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS00430: 2,5-diketo-D-gluconic acid reductase
is similar to:
PaperBLAST

G0SCE7: D-xylose reductase (EC 1.1.1.307) from Chaetomium thermophilum

38% id,
92% cov

A0MTG4: D-xylose reductase (EC 1.1.1.307) from Scheffersomyces shehatae

37% id,
92% cov

XYL1_CANTE / O74237: NAD(P)H-dependent D-xylose reductase; XR; EC 1.1.1.307 from Candida tenuis
O74237: D-xylose reductase (EC 1.1.1.307) from Yamadazyma tenuis

37% id,
92% cov

More...

CA265_RS00955: aldo/keto reductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

36% id,
92% cov

CA265_RS00525: aldo/keto reductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

33% id,
92% cov

CA265_RS00435: aldo/keto reductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

31% id,
89% cov

CA265_RS01235: hypothetical protein
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

28% id,
86% cov

CA265_RS14335: alcohol dehydrogenase
is similar to:
PaperBLAST

XYL1_PYRO7 / G4N708: NAD(P)H-dependent D-xylose reductase XYR1; XR; EC 1.1.1.307 from Pyricularia oryzae

24% id,
90% cov

G0SCE7: D-xylose reductase (EC 1.1.1.307) from Chaetomium thermophilum

24% id,
86% cov

A0A0S2PJI4: D-xylose reductase (EC 1.1.1.307) from Spathaspora passalidarum

23% id,
90% cov

More...

CA265_RS06950: L-glyceraldehyde 3-phosphate reductase
is similar to:
PaperBLAST

Q876L8: D-xylose reductase (EC 1.1.1.307) from Trichoderma reesei

28% id,
53% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

240417-241427 (frame -1) on NZ_CP021237
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis
Also see hits to annotated proteins above

36% id,
94% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory