Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)
Found 1 curated entries in PaperBLAST's database that match '1.1.1.377' as complete word(s).
These curated entries have 1 distinct sequences.
Running ublast with E ≤ 0.01
Found 15 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query
CA265_RS00310: oxidoreductase is similar to: | PaperBLAST |
RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum | 33% id, 98% cov |
CA265_RS08650: short-chain dehydrogenase is similar to: | PaperBLAST |
RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum | 32% id, 99% cov |
CA265_RS15450: 3-oxoacyl-[acyl-carrier-protein] reductase is similar to: | PaperBLAST |
RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum | 32% id, 97% cov |
CA265_RS14445: 3-oxoacyl-ACP reductase is similar to: | PaperBLAST |
RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum | 32% id, 97% cov |
CA265_RS08355: short-chain dehydrogenase is similar to: | PaperBLAST |
RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum | 31% id, 98% cov |
CA265_RS00760: 2-deoxy-D-gluconate 3-dehydrogenase is similar to: | PaperBLAST |
RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum | 30% id, 98% cov |
CA265_RS09980: NAD(P)-dependent oxidoreductase is similar to: | PaperBLAST |
RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum | 31% id, 96% cov |
CA265_RS22580: short-chain dehydrogenase is similar to: | PaperBLAST |
RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum | 30% id, 96% cov |
CA265_RS13660: oxidoreductase is similar to: | PaperBLAST |
RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum | 29% id, 100% cov |
CA265_RS13715: glucose dehydrogenase is similar to: | PaperBLAST |
RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum | 28% id, 96% cov |
CA265_RS03200: short-chain dehydrogenase is similar to: | PaperBLAST |
RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum | 27% id, 98% cov |
CA265_RS00250: oxidoreductase is similar to: | PaperBLAST |
RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum | 26% id, 99% cov |
CA265_RS16010: short-chain dehydrogenase is similar to: | PaperBLAST |
RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum | 27% id, 93% cov |
CA265_RS04990: short chain dehydrogenase is similar to: | PaperBLAST |
RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum | 28% id, 88% cov |
CA265_RS05960: short-chain dehydrogenase is similar to: | PaperBLAST |
RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum | 30% id, 76% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 13 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory