Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)
Found 4 curated entries in PaperBLAST's database that match '1.1.1.43' as complete word(s).
These curated entries have 4 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query
| CA265_RS17230: D-glycerate dehydrogenase is similar to: | PaperBLAST |
BPHYT_RS11290: 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) from Burkholderia phytofirmans | 41% id, 94% cov |
kguD / Q5TM04: 2-dehydro-6-phosphogluconate reductase (EC 1.1.1.43) from Pseudomonas fluorescens | 37% id, 90% cov |
PS417_12555: phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) from Pseudomonas simiae | 41% id, 80% cov |
| CA265_RS12240: phosphoglycerate dehydrogenase is similar to: | PaperBLAST |
PS417_12555: phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) from Pseudomonas simiae | 36% id, 99% cov |
AO353_26885: phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) from Pseudomonas fluorescens | 36% id, 96% cov |
BPHYT_RS11290: 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) from Burkholderia phytofirmans | 33% id, 99% cov |
| CA265_RS09010: 3-phosphoglycerate dehydrogenase is similar to: | PaperBLAST |
BPHYT_RS11290: 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) from Burkholderia phytofirmans | 31% id, 89% cov |
AO353_26885: phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) from Pseudomonas fluorescens | 33% id, 80% cov |
kguD / Q5TM04: 2-dehydro-6-phosphogluconate reductase (EC 1.1.1.43) from Pseudomonas fluorescens | 31% id, 82% cov |
| CA265_RS23175: phosphoglycerate dehydrogenase is similar to: | PaperBLAST |
kguD / Q5TM04: 2-dehydro-6-phosphogluconate reductase (EC 1.1.1.43) from Pseudomonas fluorescens | 27% id, 93% cov |
PS417_12555: phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) from Pseudomonas simiae | 26% id, 92% cov |
AO353_26885: phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) from Pseudomonas fluorescens | 27% id, 91% cov |
| CA265_RS10420: hydroxyacid dehydrogenase is similar to: | PaperBLAST |
AO353_26885: phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) from Pseudomonas fluorescens | 28% id, 77% cov |
kguD / Q5TM04: 2-dehydro-6-phosphogluconate reductase (EC 1.1.1.43) from Pseudomonas fluorescens | 27% id, 77% cov |
PS417_12555: phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) from Pseudomonas simiae | 26% id, 77% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory