Curated BLAST for Genomes

 

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 7 curated entries in PaperBLAST's database that match '1.1.1.77' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS24860: alcohol dehydrogenase
is similar to:
PaperBLAST

BT3767: L-lactaldehyde reductase FucO (EC 1.1.1.77) from Bacteroides thetaiotaomicron

33% id,
98% cov

FUCO_ECOLI / P0A9S1: Lactaldehyde reductase; Propanediol oxidoreductase; EC 1.1.1.77 from Escherichia coli
FucO / b2799: L-1,2-propanediol oxidoreductase (EC 1.1.1.77) from Escherichia coli
fucO / P0A9S1: L-1,2-propanediol oxidoreductase (EC 1.1.1.77) from Escherichia coli

33% id,
97% cov

rhaZ / Q8ZKS2: L-lactaldehyde reductase (EC 1.1.1.77) from Salmonella typhimurium

32% id,
98% cov

CA265_RS17470: hypothetical protein
is similar to:
PaperBLAST

YLL056C / Q12177: NADH-dependent aldehyde reductase (EC 1.1.1.77; EC 1.1.1.244; EC 1.1.1.1) from Saccharomyces cerevisiae

25% id,
65% cov

CA265_RS07665: epimerase
is similar to:
PaperBLAST

YLL056C / Q12177: NADH-dependent aldehyde reductase (EC 1.1.1.77; EC 1.1.1.244; EC 1.1.1.1) from Saccharomyces cerevisiae

24% id,
57% cov

CA265_RS14010: histidine kinase
is similar to:
PaperBLAST

YLL056C / Q12177: NADH-dependent aldehyde reductase (EC 1.1.1.77; EC 1.1.1.244; EC 1.1.1.1) from Saccharomyces cerevisiae

42% id,
24% cov

CA265_RS12965: NAD-dependent dehydratase
is similar to:
PaperBLAST

YLL056C / Q12177: NADH-dependent aldehyde reductase (EC 1.1.1.77; EC 1.1.1.244; EC 1.1.1.1) from Saccharomyces cerevisiae

33% id,
23% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory