Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)
Found 163 curated entries in PaperBLAST's database that match '1.13.11.5'.
These curated entries have 126 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query
| CA265_RS03135: homogentisate 1,2-dioxygenase is similar to: | PaperBLAST |
SO1963: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) from Shewanella oneidensis | 47% id, 100% cov |
Psest_3513: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) from Pseudomonas stutzeri | 33% id, 96% cov |
RR42_RS31275: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) from Cupriavidus basilensis | 25% id, 65% cov |
| CA265_RS19600: hypothetical protein is similar to: | PaperBLAST |
MTND_DROME / Q6AWN0: Acireductone dioxygenase; Acireductone dioxygenase (Fe(2+)-requiring); ARD'; Fe-ARD; Acireductone dioxygenase (Ni(2+)-requiring); ARD; Ni-ARD; EC 1.13.11.54; EC 1.13.11.53 from Drosophila melanogaster | 24% id, 80% cov |
MTND_SCHPO / O94286: Acireductone dioxygenase; Acireductone dioxygenase (Fe(2+)-requiring); ARD'; Fe-ARD; Acireductone dioxygenase (Ni(2+)-requiring); ARD; Ni-ARD; EC 1.13.11.54; EC 1.13.11.53 from Schizosaccharomyces pombe | 32% id, 44% cov |
| CA265_RS22645: tryptophan 2,3-dioxygenase is similar to: | PaperBLAST |
P20351: tryptophan 2,3-dioxygenase (EC 1.13.11.11); indoleamine 2,3-dioxygenase (EC 1.13.11.52) from Drosophila melanogaster | 35% id, 32% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory