Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)
Found 8 curated entries in PaperBLAST's database that match '1.13.12.2' as complete word(s).
These curated entries have 8 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query
| CA265_RS08705: glutamate synthase is similar to: | PaperBLAST |
W6JQJ6: lysine 2-monooxygenase (EC 1.13.12.2); L-amino-acid oxidase (EC 1.4.3.2) from Pseudomonas sp. | 46% id, 8% cov |
Q88QV1: lysine 2-monooxygenase (EC 1.13.12.2) from Pseudomonas putida | 46% id, 8% cov |
davB / B3IVI6: L-lysine monooxygenase monomer (EC 1.13.12.2) from Pseudomonas putida | 46% id, 8% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 4157437-4158624 (frame +1) on NZ_CP021237 is similar to: | PaperBLAST |
PfGW456L13_1171: Lysine 2-monooxygenase (EC 1.13.12.2) from Pseudomonas fluorescens | 50% id, 7% cov |
Lawrence Berkeley National Laboratory