Curated BLAST for Genomes

 

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 256 curated entries in PaperBLAST's database that match '1.14.13.2'.

These curated entries have 158 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS12360: 2-polyprenyl-6-methoxyphenol hydroxylase
is similar to:
PaperBLAST

I6YQD0: tetracycline 11a-monooxygenase (EC 1.14.13.231) from Enterobacteriaceae bacterium

38% id,
97% cov

TETX_BACFG / Q01911: Flavin-dependent monooxygenase; TetX monooxygenase; TetX; Tetracycline resistance protein from transposon Tn4351/Tn4400; EC 1.14.13.231 from Bacteroides fragilis
TETX_SPHSM / Q06DK7: Flavin-dependent monooxygenase; TetX monooxygenase; TetX; Tetracycline resistance protein; EC 1.14.13.231 from Sphingobacterium sp.
tetX / Q01911: tetracycline 11a-monooxygenase (EC 1.14.13.231) from Bacteroides fragilis
Q01911: tetracycline 11a-monooxygenase (EC 1.14.13.231) from Bacteroides fragilis

38% id,
97% cov

TETX_BACT4 / Q93L51: Flavin-dependent monooxygenase; TetX monooxygenase; TetX; TetX2; EC 1.14.13.231 from Bacteroides thetaiotaomicron
Q93L51: tetracycline 11a-monooxygenase (EC 1.14.13.231) from Bacteroides thetaiotaomicron
A0A077XNF8: tetracycline 11a-monooxygenase (EC 1.14.13.231) from Sphingobacterium sp.

38% id,
97% cov

More...

CA265_RS00350: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q5YTV5: rifampicin monooxygenase (EC 1.14.13.211) from Nocardia farcinica

36% id,
99% cov

OXYS_STRR1 / L8EUQ6: 12-dehydrotetracycline 5-monooxygenase/anhydrotetracycline 6-monooxygenase; EC 1.14.13.234; EC 1.14.13.38 from Streptomyces rimosus
oxyS / L8EUQ6: anhydrotetracycline monooxygenase monomer (EC 1.14.13.234; EC 1.14.13.38) from Streptomyces rimosus
L8EUQ6: 5a,11a-dehydrotetracycline 5-monooxygenase (EC 1.14.13.234) from Streptomyces rimosus

35% id,
99% cov

P95598: rifampicin monooxygenase (EC 1.14.13.211) from Rhodococcus hoagii

34% id,
98% cov

More...

CA265_RS16525: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

AF001965 / O08453: 3-hydroxy-2-methylpyridinecarboxylate dioxygenase monomer (EC 1.14.13.242) from Pseudomonas sp.

25% id,
50% cov

mlr6788 / Q988D3: 3-hydroxy-2-methylpyridinecarboxylate monoxygenase monomer (EC 1.14.13.242) from Mesorhizobium japonicum
Q988D3: 3-hydroxy-2-methylpyridine-5-carboxylate monooxygenase (EC 1.14.13.242) from Mesorhizobium loti

28% id,
32% cov

tcmG / P39888: tetracenomycin A2 C4,C4A,C12A hydroxylase (EC 1.14.13.200) from Streptomyces glaucescens
P39888: tetracenomycin A2 monooxygenase-dioxygenase (EC 1.14.13.200) from Streptomyces glaucescens

35% id,
10% cov

CA265_RS08705: glutamate synthase
is similar to:
PaperBLAST

TETX_BACT4 / Q93L51: Flavin-dependent monooxygenase; TetX monooxygenase; TetX; TetX2; EC 1.14.13.231 from Bacteroides thetaiotaomicron
Q93L51: tetracycline 11a-monooxygenase (EC 1.14.13.231) from Bacteroides thetaiotaomicron
A0A077XNF8: tetracycline 11a-monooxygenase (EC 1.14.13.231) from Sphingobacterium sp.

31% id,
24% cov

P95598: rifampicin monooxygenase (EC 1.14.13.211) from Rhodococcus hoagii

25% id,
25% cov

GSOX4_ARATH / Q93Y23: Flavin-containing monooxygenase FMO GS-OX4; Flavin-monooxygenase glucosinolate S-oxygenase 4; EC 1.14.13.237 from Arabidopsis thaliana
GS-OX4 / Q93Y23: glucosinolate S-oxygenase 4 (EC 1.14.13.237) from Arabidopsis thaliana
Q93Y23: aliphatic glucosinolate S-oxygenase (EC 1.14.13.237) from Arabidopsis thaliana

48% id,
11% cov

More...

CA265_RS00035: FAD-binding protein
is similar to:
PaperBLAST

pobA / F2JUE7: 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2) from Marinomonas mediterranea

35% id,
20% cov

CA265_RS12165: hypothetical protein
is similar to:
PaperBLAST

UBII_ECOLI / P25535: 2-octaprenylphenol hydroxylase; 2-polyprenylphenol 6-hydroxylase; EC 1.14.13.240 from Escherichia coli
UbiI / b2906: 2-octaprenylphenol 6-hydroxylase (EC 1.14.13.240) from Escherichia coli
ubiI / P25535: 2-octaprenylphenol 6-hydroxylase (EC 1.14.13.240) from Escherichia coli
P25535: 2-polyprenylphenol 6-hydroxylase (EC 1.14.13.240) from Escherichia coli

30% id,
17% cov

OXYE_STRRM / Q3S8R0: 6-methylpretetramide 4-monooxygenase; EC 1.14.13.232 from Streptomyces rimosus
oxyE / L8EVI4: 6-methylpretetramide 4-monooxygenase (EC 1.14.13.232) from Streptomyces rimosus
Q3S8R0: 6-methylpretetramide 4-monooxygenase (EC 1.14.13.232) from Streptomyces rimosus

47% id,
10% cov

ubiL1 / Q3J6F1: 2-methoxy-6-(all-trans-polyprenyl)phenol 4-hydroxylase (EC 1.14.13.240) from Rhodobacter sphaeroides

46% id,
8% cov

CA265_RS25315: phytoene dehydrogenase
is similar to:
PaperBLAST

VIOC_CHRVO / Q9S3U9: Violacein synthase; EC 1.14.13.224 from Chromobacterium violaceum
vioC / Q9S3U9: violacein synthase (EC 1.14.13.224) from Chromobacterium violaceum
Q9S3U9: violacein synthase (EC 1.14.13.224) from Chromobacterium violaceum

53% id,
8% cov

CA265_RS07750: aminoacetone oxidase family FAD-binding enzyme
is similar to:
PaperBLAST

MICA1_MOUSE / Q8VDP3: [F-actin]-monooxygenase MICAL1; Molecule interacting with CasL protein 1; MICAL-1; mMical1; NEDD9-interacting protein with calponin homology and LIM domains; EC 1.14.13.225; EC 1.6.3.1 from Mus musculus
Q8VDP3: F-actin monooxygenase (EC 1.14.13.225) from Mus musculus

43% id,
3% cov

MICA3_HUMAN / Q7RTP6: [F-actin]-monooxygenase MICAL3; Molecule interacting with CasL protein 3; MICAL-3; EC 1.14.13.225 from Homo sapiens

50% id,
2% cov

MICAL_DROME / Q86BA1: [F-actin]-monooxygenase Mical; Molecule interacting with CasL protein homolog; EC 1.14.13.225 from Drosophila melanogaster
Q86BA1: F-actin monooxygenase (EC 1.14.13.225) from Drosophila melanogaster

53% id,
1% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. Except for 3 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

4157437-4158624 (frame +1) on NZ_CP021237
is similar to:
PaperBLAST

AF001965 / O08453: 3-hydroxy-2-methylpyridinecarboxylate dioxygenase monomer (EC 1.14.13.242) from Pseudomonas sp.
Also see hits to annotated proteins above

25% id,
52% cov

5902132-5903628 (frame -3) on NZ_CP021237
is similar to:
PaperBLAST

tmuM / I7ASS7: trimethyluric acid monooxygenase (EC 1.14.13.212) from Pseudomonas sp.
I7ASS7: 1,3,7-trimethyluric acid 5-monooxygenase (EC 1.14.13.212) from Pseudomonas sp.
Also see hits to annotated proteins above

57% id,
9% cov

2461374-2464991 (frame +3) on NZ_CP021237
is similar to:
PaperBLAST

MICA2_HUMAN / O94851: [F-actin]-monooxygenase MICAL2; MICAL C-terminal-like protein; Mical-cL; Molecule interacting with CasL protein 2; MICAL-2; EC 1.14.13.225 from Homo sapiens

25% id,
6% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory