Curated BLAST for Genomes


Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 3 curated entries in PaperBLAST's database that match ''.

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS00350: FAD-dependent oxidoreductase
is similar to:

PRAI_PAESP / C4TP09: 4-hydroxybenzoate 3-monooxygenase (NAD(P)H); 4-hydroxybenzoate 3-hydroxylase; 4HB 3-hydroxylase; EC from Paenibacillus sp.

51% id,
10% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory