Curated BLAST for Genomes

 

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 22 curated entries in PaperBLAST's database that match '1.14.16.1' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS03175: phenylalanine 4-monooxygenase
is similar to:
PaperBLAST

Q47XN7: phenylalanine 4-monooxygenase (EC 1.14.16.1) from Colwellia psychrerythraea

24% id,
58% cov

PH4H_PHYPA / E5KBU4: Phenylalanine 4-monooxygenase, chloroplastic; Aromatic amino acid hydroxylase; Phenylalanine 4-hydroxylase; EC 1.14.16.1 from Physcomitrium patens
PAH / E5KBU4: phenylalanine hydroxylase (EC 1.14.16.1) from Physcomitrium patens

23% id,
56% cov

PH4H_CHLRE / A8HQD7: Phenylalanine 4-monooxygenase, chloroplastic; Aromatic amino acid hydroxylase; Phenylalanine 4-hydroxylase; EC 1.14.16.1 from Chlamydomonas reinhardtii
PAH / A8HQD7: phenylalanine hydroxylase (EC 1.14.16.1) from Chlamydomonas reinhardtii

25% id,
49% cov

More...

CA265_RS11630: prephenate dehydratase
is similar to:
PaperBLAST

Q8TEY0: phenylalanine 4-monooxygenase (EC 1.14.16.1) from Homo sapiens

35% id,
18% cov

PH4H_HUMAN / P00439: Phenylalanine-4-hydroxylase; PAH; Phe-4-monooxygenase; EC 1.14.16.1 from Homo sapiens
PAH / P00439: phenylalanine hydroxylase subunit (EC 1.14.16.1) from Homo sapiens
P00439: phenylalanine 4-monooxygenase (EC 1.14.16.1) from Homo sapiens

35% id,
18% cov

PH4H_DICDI / Q54XS1: Phenylalanine-4-hydroxylase; PAH; Phe-4-monooxygenase; Tryptophan 5-hydroxylase; TRH; Tryptophan 5-monooxygenase; EC 1.14.16.1; EC 1.14.16.4 from Dictyostelium discoideum

30% id,
15% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory