Curated BLAST for Genomes

 

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 41 curated entries in PaperBLAST's database that match '1.2.1.19' as complete word(s).

These curated entries have 27 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS14635: aldehyde dehydrogenase
is similar to:
PaperBLAST

AL1A1_RABIT / Q8MI17: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Oryctolagus cuniculus

40% id,
98% cov

AL1A1_HUMAN / P00352: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Homo sapiens

40% id,
97% cov

kauB / Q9HTP2: 4-guanidinobutyraldehyde dehydrogenase (EC 1.2.1.54; EC 1.2.1.19) from Pseudomonas aeruginosa

41% id,
94% cov

More...

CA265_RS24850: aldehyde dehydrogenase
is similar to:
PaperBLAST

AL1A1_RAT / P51647: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Rattus norvegicus

33% id,
90% cov

AL1A1_HUMAN / P00352: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Homo sapiens

33% id,
90% cov

AL1A1_RABIT / Q8MI17: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Oryctolagus cuniculus

33% id,
91% cov

More...

CA265_RS19780: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

kauB / Q9HTP2: 4-guanidinobutyraldehyde dehydrogenase (EC 1.2.1.54; EC 1.2.1.19) from Pseudomonas aeruginosa

31% id,
95% cov

AL1A1_RABIT / Q8MI17: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Oryctolagus cuniculus

29% id,
99% cov

AADH1_PEA / Q8VWZ1: Aminoaldehyde dehydrogenase 1, peroxisomal; PsAMADH1; Aminobutyraldehyde dehydrogenase AMADH1; Gamma-guanidinobutyraldehyde dehydrogenase AMADH1; EC 1.2.1.-; EC 1.2.1.19; EC 1.2.1.54 from Pisum sativum
Q8VWZ1: aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Pisum sativum

29% id,
98% cov

More...

CA265_RS16605: 1-pyrroline-5-carboxylate dehydrogenase
is similar to:
PaperBLAST

kauB / Q9HTP2: 4-guanidinobutyraldehyde dehydrogenase (EC 1.2.1.54; EC 1.2.1.19) from Pseudomonas aeruginosa

29% id,
96% cov

AldH / b1300: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli
puuC / P23883: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli

28% id,
96% cov

AL1A1_SHEEP / P51977: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Ovis aries

30% id,
91% cov

More...

CA265_RS19850: NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
is similar to:
PaperBLAST

AADH1_PEA / Q8VWZ1: Aminoaldehyde dehydrogenase 1, peroxisomal; PsAMADH1; Aminobutyraldehyde dehydrogenase AMADH1; Gamma-guanidinobutyraldehyde dehydrogenase AMADH1; EC 1.2.1.-; EC 1.2.1.19; EC 1.2.1.54 from Pisum sativum
Q8VWZ1: aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Pisum sativum

28% id,
97% cov

kauB / Q9HTP2: 4-guanidinobutyraldehyde dehydrogenase (EC 1.2.1.54; EC 1.2.1.19) from Pseudomonas aeruginosa

29% id,
93% cov

ADH1A_MAIZE / C0P9J6: Aminoaldehyde dehydrogenase 1a; ZmAMADH1a; 4-trimethylammoniobutyraldehyde dehydrogenase AMADH1a; Aminobutyraldehyde dehydrogenase AMADH1a; Betaine aldehyde dehydrogenase AMADH1a; Gamma-guanidinobutyraldehyde dehydrogenase AMADH1a; EC 1.2.1.-; EC 1.2.1.47; EC 1.2.1.19; EC 1.2.1.8; EC 1.2.1.54 from Zea mays
C0P9J6: aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Zea mays

28% id,
91% cov

More...

CA265_RS21385: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

AL1A1_RABIT / Q8MI17: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Oryctolagus cuniculus

30% id,
84% cov

B6ECN9: aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Solanum lycopersicum

30% id,
85% cov

AADH2_SOLLC / B6ECN9: Aminoaldehyde dehydrogenase 2; SlAMADH2; 4-trimethylammoniobutyraldehyde dehydrogenase AMADH2; Aminobutyraldehyde dehydrogenase AMADH2; Gamma-guanidinobutyraldehyde dehydrogenase AMADH2; EC 1.2.1.-; EC 1.2.1.47; EC 1.2.1.19; EC 1.2.1.54 from Solanum lycopersicum

30% id,
85% cov

More...

CA265_RS05705: aldehyde dehydrogenase (NADP(+))
is similar to:
PaperBLAST

kauB / Q9HTP2: 4-guanidinobutyraldehyde dehydrogenase (EC 1.2.1.54; EC 1.2.1.19) from Pseudomonas aeruginosa

26% id,
78% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory