Curated BLAST for Genomes

 

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 157 curated entries in PaperBLAST's database that match '1.2.1.3'.

These curated entries have 118 distinct sequences.

Running ublast with E ≤ 0.01

Found 13 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS14635: aldehyde dehydrogenase
is similar to:
PaperBLAST

ALDH_PARDP / A1B4L2: Aldehyde dehydrogenase; Acetaldehyde dehydrogenase; EC 1.2.1.3 from Paracoccus denitrificans
adh / A1B4L2: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Paracoccus denitrificans

67% id,
97% cov

Q4F895: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Rhodococcus erythropolis

66% id,
97% cov

Psest_2276: Aldehyde dehydrogenase (EC 1.2.1.3) from Pseudomonas stutzeri

64% id,
97% cov

More...

CA265_RS19780: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

SMc04385: L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) from Sinorhizobium meliloti

57% id,
98% cov

AL7A1_HUMAN / P49419: Alpha-aminoadipic semialdehyde dehydrogenase; Alpha-AASA dehydrogenase; Aldehyde dehydrogenase family 7 member A1; Antiquitin-1; Betaine aldehyde dehydrogenase; Delta1-piperideine-6-carboxylate dehydrogenase; P6c dehydrogenase; EC 1.2.1.31; EC 1.2.1.3; EC 1.2.1.8 from Homo sapiens
ALDH7A1 / P49419: Alpha-aminoadipic semialdehyde dehydrogenase (EC 1.2.1.8; EC 1.2.1.31) from Homo sapiens
P49419: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3); L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31) from Homo sapiens

55% id,
92% cov

AL7A1_RAT / Q64057: Alpha-aminoadipic semialdehyde dehydrogenase; Alpha-AASA dehydrogenase; Aldehyde dehydrogenase family 7 member A1; Antiquitin-1; Betaine aldehyde dehydrogenase; Delta1-piperideine-6-carboxylate dehydrogenase; P6c dehydrogenase; EC 1.2.1.31; EC 1.2.1.3; EC 1.2.1.8 from Rattus norvegicus

54% id,
92% cov

More...

CA265_RS21385: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

ALDH3_BACSU / P46329: Putative aldehyde dehydrogenase AldX; EC 1.2.1.3 from Bacillus subtilis

46% id,
100% cov

ALDH_PSEOL / P12693: Aldehyde dehydrogenase; EC 1.2.1.3 from Pseudomonas oleovorans

48% id,
94% cov

Q3UNF5: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus

44% id,
99% cov

More...

CA265_RS12005: glutathione-dependent formaldehyde dehydrogenase
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

34% id,
99% cov

CA265_RS18540: N-acetyl-gamma-glutamyl-phosphate reductase
is similar to:
PaperBLAST

ARGC_GEOSE / Q07906: N-acetyl-gamma-glutamyl-phosphate reductase; AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase; EC 1.2.1.38 from Geobacillus stearothermophilus

33% id,
99% cov

lysY / Q4JAQ3: [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate reductase (EC 1.2.1.38) from Sulfolobus acidocaldarius

32% id,
98% cov

P9WPZ9: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) from Mycobacterium tuberculosis

31% id,
96% cov

More...

CA265_RS24850: aldehyde dehydrogenase
is similar to:
PaperBLAST

Q5P171: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Aromatoleum aromaticum

32% id,
94% cov

aldA / RF|XP_658158.1: aldehyde dehydrogenase ALDH; EC 1.2.1.3 from Emericella nidulans

33% id,
92% cov

P27463: retinal dehydrogenase (EC 1.2.1.36) from Gallus gallus

34% id,
89% cov

More...

CA265_RS16605: 1-pyrroline-5-carboxylate dehydrogenase
is similar to:
PaperBLAST

P27463: retinal dehydrogenase (EC 1.2.1.36) from Gallus gallus

29% id,
95% cov

ALDH_DAVTA / P40108: Aldehyde dehydrogenase; ALDDH; ALDH; Allergen Cla h 3; Allergen Cla h III; Allergen Cla h 10; EC 1.2.1.3 from Davidiella tassiana

30% id,
92% cov

AL1A1_SHEEP / P51977: Retinal dehydrogenase 1; RALDH 1; RalDH1; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; EC 1.2.1.-; EC 1.2.1.36 from Ovis aries

30% id,
91% cov

More...

CA265_RS19850: NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
is similar to:
PaperBLAST

AL1A3_MOUSE / Q9JHW9: Aldehyde dehydrogenase family 1 member A3; Aldehyde dehydrogenase 6; Retinaldehyde dehydrogenase 3; RALDH-3; RalDH3; EC 1.2.1.36 from Mus musculus
Q9JHW9: retinal dehydrogenase (EC 1.2.1.36); aldehyde dehydrogenase [NAD(P)+] (EC 1.2.1.5) from Mus musculus

27% id,
96% cov

Q9DD46: retinal dehydrogenase (EC 1.2.1.36) from Gallus gallus

28% id,
91% cov

ALDH_PAENI / Q8GAK7: Aldehyde dehydrogenase; NAD/NADP-dependent aldehyde dehydrogenase; EC 1.2.1.3; EC 1.2.1.4 from Paenarthrobacter nicotinovorans

27% id,
96% cov

More...

CA265_RS05705: aldehyde dehydrogenase (NADP(+))
is similar to:
PaperBLAST

YdbG / b1385: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
feaB / P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli

26% id,
82% cov

peaE / B1N7H3: phenylacetaldehyde dehydrogenase monomer (EC 1.2.1.39) from Pseudomonas putida
B1N7H3: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

26% id,
78% cov

AL8A1_HUMAN / Q9H2A2: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase 12; Aldehyde dehydrogenase family 8 member A1; EC 1.2.1.32 from Homo sapiens
Q9H2A2: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Homo sapiens

22% id,
85% cov

More...

CA265_RS24860: alcohol dehydrogenase
is similar to:
PaperBLAST

ADHE_CLOAB / P33744: Aldehyde-alcohol dehydrogenase; AAD; EC 1.1.1.1; EC 1.2.1.3 from Clostridium acetobutylicum

27% id,
47% cov

CA265_RS07350: alcohol dehydrogenase
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

31% id,
29% cov

CA265_RS10835: AMP-binding protein
is similar to:
PaperBLAST

CAR_NOCIO / Q6RKB1: Carboxylic acid reductase; CAR; ATP/NADPH-dependent carboxylic acid reductase; Aryl aldehyde oxidoreductase; EC 1.2.1.-; EC 1.2.1.30 from Nocardia iowensis
car / Q6RKB1: carboxylic acid reductase (EC 1.2.1.30) from Nocardia iowensis
Q6RKB1: aryl-aldehyde dehydrogenase (NADP+) (EC 1.2.1.30) from Nocardia iowensis

25% id,
21% cov

CA265_RS17630: long-chain fatty acid--CoA ligase
is similar to:
PaperBLAST

B2HN69: aryl-aldehyde dehydrogenase (NADP+) (EC 1.2.1.30) from Mycobacterium marinum

28% id,
15% cov

CAR_NOCIO / Q6RKB1: Carboxylic acid reductase; CAR; ATP/NADPH-dependent carboxylic acid reductase; Aryl aldehyde oxidoreductase; EC 1.2.1.-; EC 1.2.1.30 from Nocardia iowensis
car / Q6RKB1: carboxylic acid reductase (EC 1.2.1.30) from Nocardia iowensis
Q6RKB1: aryl-aldehyde dehydrogenase (NADP+) (EC 1.2.1.30) from Nocardia iowensis

28% id,
15% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 14 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory