Curated BLAST for Genomes

 

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 97 curated entries in PaperBLAST's database that match '1.2.1.3' as complete word(s).

These curated entries have 82 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS14635: aldehyde dehydrogenase
is similar to:
PaperBLAST

ALDH_PARDP / A1B4L2: Aldehyde dehydrogenase; Acetaldehyde dehydrogenase; EC 1.2.1.3 from Paracoccus denitrificans
adh / A1B4L2: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Paracoccus denitrificans

67% id,
97% cov

Q4F895: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Rhodococcus erythropolis

66% id,
97% cov

Psest_2276: Aldehyde dehydrogenase (EC 1.2.1.3) from Pseudomonas stutzeri

64% id,
97% cov

More...

CA265_RS19780: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

AL7A1_HUMAN / P49419: Alpha-aminoadipic semialdehyde dehydrogenase; Alpha-AASA dehydrogenase; Aldehyde dehydrogenase family 7 member A1; Antiquitin-1; Betaine aldehyde dehydrogenase; Delta1-piperideine-6-carboxylate dehydrogenase; P6c dehydrogenase; EC 1.2.1.31; EC 1.2.1.3; EC 1.2.1.8 from Homo sapiens
P49419: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3); L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31) from Homo sapiens

55% id,
92% cov

AL7A1_RAT / Q64057: Alpha-aminoadipic semialdehyde dehydrogenase; Alpha-AASA dehydrogenase; Aldehyde dehydrogenase family 7 member A1; Antiquitin-1; Betaine aldehyde dehydrogenase; Delta1-piperideine-6-carboxylate dehydrogenase; P6c dehydrogenase; EC 1.2.1.31; EC 1.2.1.3; EC 1.2.1.8 from Rattus norvegicus

54% id,
92% cov

AL7B4_ARATH / Q9SYG7: Aldehyde dehydrogenase family 7 member B4; Antiquitin-1; Turgor-responsive ALDH; EC 1.2.1.3 from Arabidopsis thaliana

49% id,
98% cov

More...

CA265_RS21385: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

ALDH3_BACSU / P46329: Putative aldehyde dehydrogenase AldX; EC 1.2.1.3 from Bacillus subtilis

46% id,
100% cov

ALDH_PSEOL / P12693: Aldehyde dehydrogenase; EC 1.2.1.3 from Pseudomonas oleovorans
alkH / P12693: aldehyde dehydrogenase (EC 1.2.1.3) from Pseudomonas oleovorans

48% id,
94% cov

Q3UNF5: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus

44% id,
99% cov

More...

CA265_RS12005: glutathione-dependent formaldehyde dehydrogenase
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

34% id,
99% cov

CA265_RS24850: aldehyde dehydrogenase
is similar to:
PaperBLAST

aldA / RF|XP_658158.1: aldehyde dehydrogenase ALDH; EC 1.2.1.3 from Emericella nidulans

33% id,
92% cov

AL1A1_RAT / P51647: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Rattus norvegicus

33% id,
90% cov

AL1A1_HUMAN / P00352: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Homo sapiens

33% id,
90% cov

More...

CA265_RS16605: 1-pyrroline-5-carboxylate dehydrogenase
is similar to:
PaperBLAST

ALDH_DAVTA / P40108: Aldehyde dehydrogenase; ALDDH; ALDH; Allergen Cla h 3; Allergen Cla h III; Allergen Cla h 10; EC 1.2.1.3 from Davidiella tassiana

30% id,
92% cov

AL1A1_SHEEP / P51977: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Ovis aries

30% id,
91% cov

AL1A1_MOUSE / P24549: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Mus musculus

29% id,
93% cov

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CA265_RS19850: NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
is similar to:
PaperBLAST

ALDH_PAENI / Q8GAK7: Aldehyde dehydrogenase; NAD/NADP-dependent aldehyde dehydrogenase; EC 1.2.1.3; EC 1.2.1.4 from Paenarthrobacter nicotinovorans

27% id,
96% cov

AL1A1_BOVIN / P48644: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Bos taurus

27% id,
95% cov

AL1A1_SHEEP / P51977: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Ovis aries

27% id,
95% cov

More...

CA265_RS05705: aldehyde dehydrogenase (NADP(+))
is similar to:
PaperBLAST

Q9H2A2: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Homo sapiens

22% id,
85% cov

Q8BH00: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus

23% id,
80% cov

ALDY_BACSU / P94358: Putative aldehyde dehydrogenase AldY; EC 1.2.1.3 from Bacillus subtilis

22% id,
67% cov

CA265_RS24860: alcohol dehydrogenase
is similar to:
PaperBLAST

ADHE_CLOAB / P33744: Aldehyde-alcohol dehydrogenase; AAD; EC 1.1.1.1; EC 1.2.1.3 from Clostridium acetobutylicum

27% id,
47% cov

CA265_RS07350: alcohol dehydrogenase
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

31% id,
29% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory