Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)
Found 108 curated entries in PaperBLAST's database that match '1.4.1.2'.
These curated entries have 87 distinct sequences.
Running ublast with E ≤ 0.01
Found 12 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query
| CA265_RS25185: glycine dehydrogenase (aminomethyl-transferring) is similar to: | PaperBLAST |
P33195: glycine cleavage system (subunit 1/3) (EC 1.4.1.27) from Escherichia coli | 56% id, 99% cov |
Q94B78: glycine cleavage system (subunit 4/5) (EC 1.4.1.27) from Arabidopsis thaliana | 58% id, 93% cov |
P26969: glycine cleavage system (subunit 3/4) (EC 1.4.1.27) from Pisum sativum | 59% id, 91% cov |
| CA265_RS24150: dihydrolipoyl dehydrogenase is similar to: | PaperBLAST |
P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum | 52% id, 93% cov |
Q9M5K3: glycine cleavage system (subunit 5/5) (EC 1.4.1.27) from Arabidopsis thaliana | 52% id, 92% cov |
P09622: pyruvate dehydrogenase system (subunit 1/5) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (subunit 1/4) (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4); dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Homo sapiens | 50% id, 92% cov |
| CA265_RS23960: glycine cleavage system protein T is similar to: | PaperBLAST |
Q9WY54: glycine cleavage system (EC 1.4.1.27) from Thermotoga maritima | 46% id, 98% cov |
Q5NHP0: glycine cleavage system (EC 1.4.1.27) from Francisella tularensis | 39% id, 98% cov |
gcvT / P54261: glycine cleavage system T-protein (EC 1.4.1.27) from Synechocystis sp. | 41% id, 93% cov |
| CA265_RS18980: glycine cleavage system protein H is similar to: | PaperBLAST |
gcvH / P73560: glycine cleavage system H-protein (EC 1.4.1.27) from Synechocystis sp. | 48% id, 93% cov |
P0A6T9: glycine cleavage system (subunit 2/3) (EC 1.4.1.27) from Escherichia coli | 46% id, 96% cov |
B0F467: glycine cleavage system (subunit 5/5) (EC 1.4.1.27) from Paratrimastix pyriformis | 45% id, 85% cov |
| CA265_RS13255: leucine dehydrogenase is similar to: | PaperBLAST |
DHPH_BACBA / Q59224: Phenylalanine dehydrogenase; PheDH; EC 1.4.1.20 from Bacillus badius | 48% id, 92% cov |
DHPH_THEIN / P22823: Phenylalanine dehydrogenase; PheDH; EC 1.4.1.20 from Thermoactinomyces intermedius | 44% id, 96% cov |
DHPH_CALTT / F5L9G2: Phenylalanine dehydrogenase; PheDH; EC 1.4.1.20 from Caldalkalibacillus thermarum | 44% id, 95% cov |
| CA265_RS03475: glutamate dehydrogenase is similar to: | PaperBLAST |
P00366: glutamate dehydrogenase (EC 1.4.1.2); glutamate dehydrogenase [NAD(P)+] (EC 1.4.1.3) from Bos taurus | 51% id, 85% cov |
P96110: trimer complex (EC 1.4.1.2) from Thermotoga maritima | 43% id, 86% cov |
DHE2_BACSU / P39633: Catabolic NAD-specific glutamate dehydrogenase RocG; NAD-GDH; Glutamate dehydrogenase; GlutDH; Trigger enzyme RocG; EC 1.4.1.2 from Bacillus subtilis | 36% id, 93% cov |
| CA265_RS05155: dihydrolipoyl dehydrogenase is similar to: | PaperBLAST |
P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum | 41% id, 92% cov |
Q9M5K3: glycine cleavage system (subunit 5/5) (EC 1.4.1.27) from Arabidopsis thaliana | 41% id, 91% cov |
O08749: glycine cleavage system (subunit 1/2) (EC 1.4.1.27) from Mus musculus | 38% id, 92% cov |
| CA265_RS09995: nitrite reductase (NAD(P)H) is similar to: | PaperBLAST |
P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli | 23% id, 74% cov |
| CA265_RS25145: adenosylhomocysteinase is similar to: | PaperBLAST |
DHPH_CALTT / F5L9G2: Phenylalanine dehydrogenase; PheDH; EC 1.4.1.20 from Caldalkalibacillus thermarum | 28% id, 49% cov |
| CA265_RS10015: NAD(P)H-nitrite reductase is similar to: | PaperBLAST |
P09622: pyruvate dehydrogenase system (subunit 1/5) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (subunit 1/4) (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4); dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Homo sapiens | 28% id, 45% cov |
| CA265_RS00035: FAD-binding protein is similar to: | PaperBLAST |
P09622: pyruvate dehydrogenase system (subunit 1/5) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (subunit 1/4) (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4); dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Homo sapiens | 25% id, 32% cov |
P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli | 48% id, 6% cov |
| CA265_RS07350: alcohol dehydrogenase is similar to: | PaperBLAST |
Q9Y8I4: glutamate dehydrogenase (EC 1.4.1.2) from Pyrobaculum islandicum | 41% id, 14% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 10 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 5881435-5882913 (frame +1) on NZ_CP021237 is similar to: | PaperBLAST |
P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum | 51% id, 96% cov |
O08749: glycine cleavage system (subunit 1/2) (EC 1.4.1.27) from Mus musculus | 48% id, 94% cov |
Lawrence Berkeley National Laboratory