Curated BLAST for Genomes

 

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 43 curated entries in PaperBLAST's database that match '1.4.3.21' as complete word(s).

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS16525: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

AOFB_HUMAN / P27338: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Homo sapiens
MAOB / P27338: monoamine oxidase B subunit (EC 1.4.3.21; EC 1.4.3.4) from Homo sapiens

27% id,
20% cov

AOFB_BOVIN / P56560: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Bos taurus

32% id,
15% cov

CA265_RS24235: phytoene dehydrogenase
is similar to:
PaperBLAST

AOFB_RAT / P19643: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Rattus norvegicus

35% id,
12% cov

AOFB_HUMAN / P27338: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Homo sapiens
MAOB / P27338: monoamine oxidase B subunit (EC 1.4.3.21; EC 1.4.3.4) from Homo sapiens

35% id,
12% cov

AOFB_MOUSE / Q8BW75: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Mus musculus

35% id,
12% cov

More...

CA265_RS15345: GMC family oxidoreductase
is similar to:
PaperBLAST

AOFA_HUMAN / P21397: Amine oxidase [flavin-containing] A; Monoamine oxidase type A; MAO-A; EC 1.4.3.21; EC 1.4.3.4 from Homo sapiens

59% id,
6% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory