Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 119 curated entries in PaperBLAST's database that match '1.5.1.2'.

These curated entries have 99 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS18505: pyrroline-5-carboxylate reductase is similar to:	PaperBLAST
CA265_RS18505: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Pedobacter sp.	100% id, 100% cov
BT3757: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Bacteroides thetaiotaomicron	41% id, 99% cov
P5CR_METAC / Q9HH99: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; PCA reductase; EC 1.5.1.2 from Methanosarcina acetivorans	33% id, 99% cov
PROC1 / F2E7Q2: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Hordeum vulgare	31% id, 95% cov
G7KRM5: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Medicago truncatula	30% id, 95% cov
Shew_1136: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Shewanella loihica	31% id, 91% cov
P5CR_PSEAE / P22008: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; PCA reductase; EC 1.5.1.2 from Pseudomonas aeruginosa	29% id, 98% cov
DVU2332: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Desulfovibrio vulgaris	28% id, 97% cov
P5CR2_BACSU / P54552: Pyrroline-5-carboxylate reductase 2; P5C reductase 2; P5CR 2; PCA reductase 2; EC 1.5.1.2 from Bacillus subtilis	28% id, 95% cov
Q4DH60: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Trypanosoma cruzi	28% id, 94% cov
DvMF_3161: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Desulfovibrio vulgaris	27% id, 97% cov
F4K884: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Arabidopsis thaliana	26% id, 92% cov
P5CR3_HUMAN / Q53H96: Pyrroline-5-carboxylate reductase 3; P5C reductase 3; P5CR 3; Pyrroline-5-carboxylate reductase-like protein; EC 1.5.1.2 from Homo sapiens	25% id, 97% cov
More...

CA265_RS23445: methylenetetrahydrofolate reductase [NAD(P)H] is similar to:	PaperBLAST
Q8A146: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Bacteroides thetaiotaomicron	49% id, 100% cov
O67422: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Aquifex aeolicus	37% id, 97% cov
Q72DD2: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Desulfovibrio vulgaris	31% id, 99% cov
metF: 5,10-methylenetetrahydrofolate reductase; EC 1.5.1.20 from Leptospira interrogans Q9L5C1: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Leptospira interrogans	30% id, 98% cov
Q8DQT1: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Streptococcus pneumoniae	32% id, 94% cov
Q5SLG6: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Thermus thermophilus Q72H39: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Thermus thermophilus	30% id, 97% cov
Q8NNM2: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Corynebacterium glutamicum	32% id, 90% cov
Q8Y389: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Ralstonia solanacearum	30% id, 96% cov
Q7NZF6: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Chromobacterium violaceum	31% id, 93% cov
Q6J6A1: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Collimonas fungivorans	29% id, 97% cov
A0A0H3LLF9: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Bordetella bronchiseptica	30% id, 96% cov
Q87V72: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Pseudomonas syringae	30% id, 95% cov
Q7UNJ7: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Rhodopirellula baltica	30% id, 93% cov
Q6NGB6: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Corynebacterium diphtheriae	31% id, 90% cov
Q83A63: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Coxiella burnetii	30% id, 93% cov
Q7VRL4: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Candidatus Blochmannia	29% id, 94% cov
Q9CP31: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Pasteurella multocida	29% id, 95% cov
Q8G652: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Bifidobacterium longum	28% id, 97% cov
Q9PEA7: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Xylella fastidiosa	27% id, 98% cov
MetF / b3941: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) from Escherichia coli Q0SY49: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Shigella flexneri	28% id, 94% cov
A0A0H3G3R1: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Brucella suis	30% id, 88% cov
Q7MYD0: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Photorhabdus luminescens	28% id, 95% cov
Q6N3J2: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Rhodopseudomonas palustris	28% id, 90% cov
Q92NK1: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Sinorhizobium meliloti	30% id, 85% cov
Q87L52: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Vibrio parahaemolyticus	28% id, 88% cov
Q9KNP6: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Vibrio cholerae	29% id, 87% cov
Q89UJ7: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Bradyrhizobium japonicum	28% id, 88% cov
Q98K87: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Mesorhizobium loti	27% id, 90% cov
Q9A6F4: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Caulobacter vibrioides	27% id, 89% cov
Q7MH66: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Vibrio vulnificus	29% id, 80% cov
Q7CXU3: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Agrobacterium tumefaciens	25% id, 90% cov
O80585: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20); methylenetetrahydrofolate reductase (NADH) (EC 1.5.1.54) from Arabidopsis thaliana	32% id, 50% cov
MTHR1_SCHPO / Q10258: Methylenetetrahydrofolate reductase 1; EC 1.5.1.20 from Schizosaccharomyces pombe met9 / GI\|1204232: methylenetetrahydrofolate reductase Met9; EC 1.5.1.20 from Schizosaccharomyces pombe Q10258: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Schizosaccharomyces pombe	33% id, 48% cov
Q5AEI0: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Candida albicans	33% id, 48% cov
P53128: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20); methylenetetrahydrofolate reductase (NADPH) (EC 1.5.1.53) from Saccharomyces cerevisiae	33% id, 48% cov
Q10BJ7: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Oryza sativa	32% id, 48% cov
Q54X84: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Dictyostelium discoideum	34% id, 46% cov
Q9SE94: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20); methylenetetrahydrofolate reductase (NADH) (EC 1.5.1.54) from Zea mays	32% id, 49% cov
Q2UEQ8: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Aspergillus oryzae	32% id, 47% cov
metF: methylenetetrahydrofolate reductase; EC 1.5.1.20 from Emericella nidulans Q5B0P7: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Aspergillus nidulans	32% id, 46% cov
Q6FU20: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from [Candida] glabrata	32% id, 47% cov
Q5I598: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Bos taurus	32% id, 44% cov
Q9WU20: methylenetetrahydrofolate dehydrogenase (NAD+) (EC 1.5.1.15); methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Mus musculus	32% id, 43% cov
Q60HE5: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Macaca fascicularis	32% id, 43% cov
P42898: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20); methylenetetrahydrofolate reductase (NADPH) (EC 1.5.1.53) from Homo sapiens	31% id, 43% cov
Q17693: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Caenorhabditis elegans	32% id, 42% cov
Q7ZWU2: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Xenopus laevis	30% id, 44% cov
met11 / RF\|NP_593430.1: methylenetetrahydrofolate reductase Met11; EC 1.5.1.20 from Schizosaccharomyces pombe	32% id, 34% cov
Q4T956: methylenetetrahydrofolate reductase [NAD(P)H] (EC 1.5.1.20) from Tetraodon nigroviridis	30% id, 33% cov
metA: methylenetetrahydrofolate reductase; EC 1.5.1.20 from Emericella nidulans	30% id, 31% cov
More...

CA265_RS15615: malate dehydrogenase is similar to:	PaperBLAST
PY2CR_PSEPU / Q5FB93: Delta(1)-pyrroline-2-carboxylate/Delta(1)-piperideine-2-carboxylate reductase; Pyr2C/Pip2C reductase; N-methyl-L-amino acid dehydrogenase; NMAADH; EC 1.5.1.21; EC 1.4.1.17 from Pseudomonas putida	30% id, 80% cov
PY2CR_PSEAE / Q9I492: Delta(1)-pyrroline-2-carboxylate/Delta(1)-piperideine-2-carboxylate reductase; Pyr2C/Pip2C reductase; Delta(1)-pyrroline-(4S)-hydroxy-2-carboxylate reductase; Pyr4SH2C reductase; Proline ketimine reductase; EC 1.5.1.21; EC 1.5.1.- from Pseudomonas aeruginosa Q9I492: 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase (NADPH) (EC 1.5.1.21) from Pseudomonas aeruginosa	27% id, 73% cov

CA265_RS23440: methionine synthase is similar to:	PaperBLAST
YITJ_BACSU / O06745: Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase; EC 2.1.1.10; EC 1.5.1.20 from Bacillus subtilis	27% id, 50% cov

CA265_RS00430: 2,5-diketo-D-gluconic acid reductase is similar to:	PaperBLAST
STORR_PAPSO / P0DKI7: Bifunctional protein STORR; (S)- to (R)-reticuline; EC 1.14.19.54; EC 1.5.1.27 from Papaver somniferum P0DKI7: 1,2-dehydroreticuline synthase (EC 1.14.19.54); 1,2-dehydroreticulinium reductase (NADPH) (EC 1.5.1.27) from Papaver somniferum	35% id, 32% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

94465-95325 (frame +1) on NZ_CP021237 is similar to:	PaperBLAST
STORR_PAPSO / P0DKI7: Bifunctional protein STORR; (S)- to (R)-reticuline; EC 1.14.19.54; EC 1.5.1.27 from Papaver somniferum P0DKI7: 1,2-dehydroreticuline synthase (EC 1.14.19.54); 1,2-dehydroreticulinium reductase (NADPH) (EC 1.5.1.27) from Papaver somniferum Also see hits to annotated proteins above	35% id, 32% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory