Curated BLAST for Genomes

 

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 63 curated entries in PaperBLAST's database that match '1.8.1.4' as complete word(s).

These curated entries have 47 distinct sequences.

Running ublast with E ≤ 0.01

Found 14 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS24150: dihydrolipoyl dehydrogenase
is similar to:		 PaperBLAST

DLDH_HYMDI / P80647: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Hymenolepis diminuta

 76% id,
92% cov

DLDH_PSEFL / P14218: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of 2-oxoglutarate dehydrogenase complex; EC 1.8.1.4 from Pseudomonas fluorescens

 53% id,
98% cov

Q9I3D1: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa
A0A0H2Z9F5: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa

 53% id,
98% cov

More...

CA265_RS05155: dihydrolipoyl dehydrogenase
is similar to:		 PaperBLAST

DLDH_HYMDI / P80647: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Hymenolepis diminuta

 60% id,
89% cov

P50970: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Zymomonas mobilis

 51% id,
99% cov

B6F1A8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Microbacterium luteolum

 46% id,
100% cov

More...

CA265_RS25100: hypothetical protein
is similar to:		 PaperBLAST

B6F1A8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Microbacterium luteolum

 25% id,
71% cov

DLDH_CORGL / Q8NTE1: Dihydrolipoyl dehydrogenase; LPD; Dihydrolipoamide dehydrogenase; E3 component of alpha-ketoacid dehydrogenase complexes; EC 1.8.1.4 from Corynebacterium glutamicum

 26% id,
67% cov

DLDH_MYCTU / P9WHH9: Dihydrolipoyl dehydrogenase; LPD; Component of peroxynitrite reductase/peroxidase complex; Component of PNR/P; Dihydrolipoamide dehydrogenase; E3 component of alpha-ketoacid dehydrogenase complexes; EC 1.8.1.4 from Mycobacterium tuberculosis
P9WHH8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Mycobacterium tuberculosis
P9WHH9: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Mycobacterium tuberculosis

 25% id,
68% cov

More...

CA265_RS10630: thioredoxin-disulfide reductase
is similar to:		 PaperBLAST

lpdA / O84561: dihydrolipoyl dehydrogenase subunit (EC 1.8.1.4) from Chlamydia trachomatis

 25% id,
72% cov

pdhD / P75393: pyruvate dehydrogenase complex E3 component (EC 1.8.1.4) from Mycoplasma pneumoniae

 24% id,
66% cov

CA265_RS09995: nitrite reductase (NAD(P)H)
is similar to:		 PaperBLAST

DLDH_THESS / P85207: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Thermus scotoductus

 28% id,
62% cov

DLDH_ECOLI / P0A9P0: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes; Glycine cleavage system L protein; EC 1.8.1.4 from Escherichia coli
Lpd / b0116: lipoamide dehydrogenase (EC 1.8.1.4) from Escherichia coli
lpd / SP|P0A9P1: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Escherichia coli
lpd / P0A9P0: lipoamide dehydrogenase (EC 1.8.1.4) from Escherichia coli
P0A9P0: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli

 23% id,
74% cov

Q9I3D1: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa
A0A0H2Z9F5: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa

 27% id,
51% cov

More...

CA265_RS10015: NAD(P)H-nitrite reductase
is similar to:		 PaperBLAST

A5N930: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Clostridium kluyveri

 24% id,
70% cov

Q04829: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Haloferax volcanii

 23% id,
59% cov

LPD1: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Candida albicans

 28% id,
46% cov

More...

CA265_RS19585: pyruvate dehydrogenase
is similar to:		 PaperBLAST

Q8VPK7: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Streptococcus pneumoniae

 25% id,
49% cov

lpdA / B3TZD6: dihydrolipoamide dehydrogenase (EC 1.8.1.4) from Advenella kashmirensis

 28% id,
25% cov

pdhL: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Cupriavidus necator
Q0KBV8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Cupriavidus necator

 30% id,
18% cov

More...

CA265_RS08705: glutamate synthase
is similar to:		 PaperBLAST

Q04829: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Haloferax volcanii

 30% id,
35% cov

A4V929: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Acidianus ambivalens

 24% id,
40% cov

acoL: TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Clostridium magnum

 35% id,
10% cov

CA265_RS00035: FAD-binding protein
is similar to:		 PaperBLAST

A5N930: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Clostridium kluyveri

 26% id,
36% cov

lpdG / GI|1256717: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Pseudomonas putida

 22% id,
38% cov

DLDH_HUMAN / P09622: Dihydrolipoyl dehydrogenase, mitochondrial; Dihydrolipoamide dehydrogenase; Glycine cleavage system L protein; EC 1.8.1.4 from Homo sapiens
DLD / P09622: dihydrolipoyl dehydrogenase monomer (EC 1.8.1.4) from Homo sapiens
P09622: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Homo sapiens

 25% id,
32% cov

More...

CA265_RS07875: FAD-dependent oxidoreductase
is similar to:		 PaperBLAST

dld1 / RF|NP_593496.1: dihydrolipoamide dehydrogenase Dld1; EC 1.8.1.4 from Schizosaccharomyces pombe

 28% id,
28% cov

CA265_RS17525: dihydrolipoamide succinyltransferase
is similar to:		 PaperBLAST

pdhL: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Cupriavidus necator
Q0KBV8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Cupriavidus necator

 35% id,
22% cov

CA265_RS09070: diapophytoene dehydrogenase
is similar to:		 PaperBLAST

acoL: TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Clostridium magnum

 28% id,
17% cov

CA265_RS12165: hypothetical protein
is similar to:		 PaperBLAST

DLDH_CHATD / G0SB20: Dihydrolipoamide dehydrogenase; Lipoamide dehydrogenase component of pyruvate dehydrogenase complex; Pyruvate dehydrogenase complex E3 component; EC 1.8.1.4 from Chaetomium thermophilum

 36% id,
12% cov

Q8VPK7: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Streptococcus pneumoniae

 35% id,
12% cov

A5N930: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Clostridium kluyveri

 46% id,
8% cov

More...

CA265_RS23630: acetyl-CoA carboxylase biotin carboxyl carrier protein subunit
is similar to:		 PaperBLAST

acoL: TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Clostridium magnum

 32% id,
11% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 14 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory