Curated BLAST for Genomes

 

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 82 curated entries in PaperBLAST's database that match '2.3.1.31'.

These curated entries have 73 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS08175: homoserine O-acetyltransferase
is similar to:
PaperBLAST

METXA_PSYTT / K4ICC9: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Psychroflexus torquis

54% id,
99% cov

METXA_CYCMS / G0J5N4: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Cyclobacterium marinum

48% id,
97% cov

METXA_TRIV2 / Q3M5Q6: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Trichormus variabilis

42% id,
95% cov

More...

CA265_RS09250: NAD-dependent protein deacylase
is similar to:
PaperBLAST

cobB / P75960: protein-lysine deacetylase/desuccinylase/delipoylase (EC 2.3.1.286; EC 2.3.1.313) from Escherichia coli

51% id,
66% cov

SIRT4 / Q9Y6E7: NAD-dependent lipoamidase SIRT4 (EC 2.3.1.313) from Homo sapiens

34% id,
35% cov

CA265_RS21340: secretion protein HlyD
is similar to:
PaperBLAST

METXA_PSYTT / K4ICC9: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Psychroflexus torquis

25% id,
42% cov

CA265_RS10675: IMP dehydrogenase
is similar to:
PaperBLAST

METXA_METVS / A6UNL1: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Methanococcus vannielii

26% id,
38% cov

METXA_METLZ / A2SQW3: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Methanocorpusculum labreanum

27% id,
33% cov

METXA_METEZ / D7E9E0: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Methanohalobium evestigatum

36% id,
23% cov

More...

CA265_RS08900: D-arabinose 5-phosphate isomerase
is similar to:
PaperBLAST

METXA_METVS / A6UNL1: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Methanococcus vannielii

29% id,
22% cov

METXA_METRM / D3E3E4: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Methanobrevibacter ruminantium

25% id,
22% cov

CA265_RS13285: magnesium transporter
is similar to:
PaperBLAST

METXA_METVS / A6UNL1: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Methanococcus vannielii

20% id,
30% cov

METXA_METRM / D3E3E4: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Methanobrevibacter ruminantium

30% id,
17% cov

CA265_RS09480: magnesium transporter
is similar to:
PaperBLAST

METXA_METFP / K2QXP6: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Methanobacterium formicicum

27% id,
22% cov

METXA_METVS / A6UNL1: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Methanococcus vannielii

21% id,
25% cov

METXA_METRM / D3E3E4: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Methanobrevibacter ruminantium

27% id,
19% cov

CA265_RS25135: histidine kinase
is similar to:
PaperBLAST

METXA_METFP / K2QXP6: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Methanobacterium formicicum

36% id,
13% cov

CA265_RS15780: hypothetical protein
is similar to:
PaperBLAST

METXA_THET2 / Q9RA51: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Thermus thermophilus

28% id,
17% cov

CA265_RS13890: alpha/beta hydrolase
is similar to:
PaperBLAST

METXA_THET2 / Q9RA51: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Thermus thermophilus

41% id,
11% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory