Curated BLAST for Genomes

 

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 133 curated entries in PaperBLAST's database that match '2.3.1.9'.

These curated entries have 105 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS06590: acetyl-CoA acetyltransferase
is similar to:
PaperBLAST

ERG10_SCHPO / Q9UQW6: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Ergosterol biosynthesis protein 10; EC 2.3.1.9 from Schizosaccharomyces pombe

59% id,
99% cov

A0A1S6KJS1: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Ginkgo biloba

61% id,
96% cov

ACCT2_ARATH / Q8S4Y1: Acetyl-CoA acetyltransferase 2; Acetoacetyl-CoA thiolase 2; Thiolase 2; Protein EMBRYO DEFECTIVE 1276; EC 2.3.1.9 from Arabidopsis thaliana
Q8S4Y1: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Arabidopsis thaliana

59% id,
98% cov

More...

CA265_RS17585: acetyl-CoA acetyltransferase
is similar to:
PaperBLAST

THLA_CLOAB / P45359: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; CaTHL; EC 2.3.1.9 from Clostridium acetobutylicum
P45359: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Clostridium acetobutylicum

42% id,
99% cov

AO356_21640: acetyl-CoA C-acetyltransferase [EC: 2.3.1.9] from Pseudomonas fluorescens

41% id,
99% cov

BKTB_CUPNH / Q0KBP1: Beta-ketothiolase BktB; Acetyl-CoA acetyltransferase; Acetyl-CoA acyltransferase; EC 2.3.1.16; EC 2.3.1.9 from Cupriavidus necator
bktB / Q0KBP1: β-ketothiolase (EC 2.3.1.16; EC 2.3.1.9) from Cupriavidus necator

41% id,
99% cov

More...

CA265_RS16535: type III polyketide synthase
is similar to:
PaperBLAST

F6HP26: trihydroxystilbene synthase (EC 2.3.1.95) from Vitis vinifera

27% id,
94% cov

Q84Q58: trihydroxystilbene synthase (EC 2.3.1.95) from Rheum tataricum

27% id,
95% cov

A8I4W6: trihydroxystilbene synthase (EC 2.3.1.95) from Vitis vinifera

27% id,
94% cov

More...

CA265_RS13875: erythronolide synthase
is similar to:
PaperBLAST

ERG10_CANAL / A0A1D8PH52: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Ergosterol biosynthesis protein 10; EC 2.3.1.9 from Candida albicans

25% id,
56% cov

ERYA3_SACER / Q03133: 6-deoxyerythronolide-B synthase EryA3, modules 5 and 6; DEBS 3; 6-deoxyerythronolide B synthase III; Erythronolide synthase; ORF C; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03133: 6-deoxyerythronolide-B synthase (EC 2.3.1.94) from Saccharopolyspora erythraea

30% id,
25% cov

ERYA1_SACER / Q03131: 6-deoxyerythronolide-B synthase EryA1, modules 1 and 2; DEBS 1; 6-deoxyerythronolide B synthase I; Erythronolide synthase; ORF C; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03131: 6-deoxyerythronolide-B synthase (subunit 3/3) (EC 2.3.1.94) from Saccharopolyspora erythraea

29% id,
25% cov

More...

CA265_RS18755: beta-ketoacyl-[acyl-carrier-protein] synthase II
is similar to:
PaperBLAST

B1YB71: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Pyrobaculum neutrophilum

27% id,
52% cov

ERYA3_SACER / Q03133: 6-deoxyerythronolide-B synthase EryA3, modules 5 and 6; DEBS 3; 6-deoxyerythronolide B synthase III; Erythronolide synthase; ORF C; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03133: 6-deoxyerythronolide-B synthase (EC 2.3.1.94) from Saccharopolyspora erythraea

27% id,
13% cov

CA265_RS09880: beta-ketoacyl-[acyl-carrier-protein] synthase II
is similar to:
PaperBLAST

AACT1_ARATH / Q9FIK7: Acetyl-CoA acetyltransferase 1; Acetoacetyl-CoA thiolase 1; Thiolase 1; EC 2.3.1.9 from Arabidopsis thaliana
Q9FIK7: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Arabidopsis thaliana

34% id,
28% cov

A0A0M4F9H9: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Euphorbia helioscopia

33% id,
28% cov

B1YB71: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Pyrobaculum neutrophilum

27% id,
27% cov

CA265_RS13880: beta-ketoacyl synthase
is similar to:
PaperBLAST

ERYA2_SACER / Q03132: 6-deoxyerythronolide-B synthase EryA2, modules 3 and 4; DEBS 2; 6-deoxyerythronolide B synthase II; Erythronolide synthase; ORF B; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03132: 6-deoxyerythronolide-B synthase (subunit 2/3) (EC 2.3.1.94) from Saccharopolyspora erythraea

26% id,
20% cov

ERYA3_SACER / Q03133: 6-deoxyerythronolide-B synthase EryA3, modules 5 and 6; DEBS 3; 6-deoxyerythronolide B synthase III; Erythronolide synthase; ORF C; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03133: 6-deoxyerythronolide-B synthase (EC 2.3.1.94) from Saccharopolyspora erythraea

39% id,
9% cov

ERYA1_SACER / Q03131: 6-deoxyerythronolide-B synthase EryA1, modules 1 and 2; DEBS 1; 6-deoxyerythronolide B synthase I; Erythronolide synthase; ORF C; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03131: 6-deoxyerythronolide-B synthase (subunit 3/3) (EC 2.3.1.94) from Saccharopolyspora erythraea

38% id,
8% cov

CA265_RS21895: [acyl-carrier-protein] S-malonyltransferase
is similar to:
PaperBLAST

ERYA3_SACER / Q03133: 6-deoxyerythronolide-B synthase EryA3, modules 5 and 6; DEBS 3; 6-deoxyerythronolide B synthase III; Erythronolide synthase; ORF C; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03133: 6-deoxyerythronolide-B synthase (EC 2.3.1.94) from Saccharopolyspora erythraea

30% id,
9% cov

ERYA2_SACER / Q03132: 6-deoxyerythronolide-B synthase EryA2, modules 3 and 4; DEBS 2; 6-deoxyerythronolide B synthase II; Erythronolide synthase; ORF B; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03132: 6-deoxyerythronolide-B synthase (subunit 2/3) (EC 2.3.1.94) from Saccharopolyspora erythraea

29% id,
8% cov

ERYA1_SACER / Q03131: 6-deoxyerythronolide-B synthase EryA1, modules 1 and 2; DEBS 1; 6-deoxyerythronolide B synthase I; Erythronolide synthase; ORF C; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03131: 6-deoxyerythronolide-B synthase (subunit 3/3) (EC 2.3.1.94) from Saccharopolyspora erythraea

28% id,
8% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. Except for 4 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1629788-1630972 (frame -2) on NZ_CP021237
is similar to:
PaperBLAST

A0A1S6KJS1: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Ginkgo biloba
Also see hits to annotated proteins above

60% id,
98% cov

3485927-3493027 (frame +2) on NZ_CP021237
is similar to:
PaperBLAST

ERYA3_SACER / Q03133: 6-deoxyerythronolide-B synthase EryA3, modules 5 and 6; DEBS 3; 6-deoxyerythronolide B synthase III; Erythronolide synthase; ORF C; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03133: 6-deoxyerythronolide-B synthase (EC 2.3.1.94) from Saccharopolyspora erythraea
Also see hits to annotated proteins above

30% id,
27% cov

ERYA2_SACER / Q03132: 6-deoxyerythronolide-B synthase EryA2, modules 3 and 4; DEBS 2; 6-deoxyerythronolide B synthase II; Erythronolide synthase; ORF B; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03132: 6-deoxyerythronolide-B synthase (subunit 2/3) (EC 2.3.1.94) from Saccharopolyspora erythraea
Also see hits to annotated proteins above

31% id,
23% cov

3493241-3497482 (frame +2) on NZ_CP021237
is similar to:
PaperBLAST

ERYA2_SACER / Q03132: 6-deoxyerythronolide-B synthase EryA2, modules 3 and 4; DEBS 2; 6-deoxyerythronolide B synthase II; Erythronolide synthase; ORF B; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03132: 6-deoxyerythronolide-B synthase (subunit 2/3) (EC 2.3.1.94) from Saccharopolyspora erythraea
Also see hits to annotated proteins above

30% id,
12% cov

5377404-5378315 (frame +3) on NZ_CP021237
is similar to:
PaperBLAST

ERYA3_SACER / Q03133: 6-deoxyerythronolide-B synthase EryA3, modules 5 and 6; DEBS 3; 6-deoxyerythronolide B synthase III; Erythronolide synthase; ORF C; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03133: 6-deoxyerythronolide-B synthase (EC 2.3.1.94) from Saccharopolyspora erythraea
Also see hits to annotated proteins above

30% id,
9% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory