Curated BLAST for Genomes

 

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 63 curated entries in PaperBLAST's database that match '2.3.1.9' as complete word(s).

These curated entries have 52 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS06590: acetyl-CoA acetyltransferase
is similar to:
PaperBLAST

ERG10_SCHPO / Q9UQW6: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Ergosterol biosynthesis protein 10; EC 2.3.1.9 from Schizosaccharomyces pombe

59% id,
99% cov

A0A1S6KJS1: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Ginkgo biloba

61% id,
96% cov

ACCT2_ARATH / Q8S4Y1: Acetyl-CoA acetyltransferase 2; Acetoacetyl-CoA thiolase 2; Thiolase 2; Protein EMBRYO DEFECTIVE 1276; EC 2.3.1.9 from Arabidopsis thaliana
Q8S4Y1: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Arabidopsis thaliana

59% id,
98% cov

More...

CA265_RS17585: acetyl-CoA acetyltransferase
is similar to:
PaperBLAST

THLA_CLOAB / P45359: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; CaTHL; EC 2.3.1.9 from Clostridium acetobutylicum
P45359: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Clostridium acetobutylicum

42% id,
99% cov

AO356_21640: acetyl-CoA C-acetyltransferase [EC: 2.3.1.9] from Pseudomonas fluorescens

41% id,
99% cov

BKTB_CUPNH / Q0KBP1: Beta-ketothiolase BktB; Acetyl-CoA acetyltransferase; Acetyl-CoA acyltransferase; EC 2.3.1.16; EC 2.3.1.9 from Cupriavidus necator
bktB / Q0KBP1: β-ketothiolase (EC 2.3.1.16; EC 2.3.1.9) from Cupriavidus necator

41% id,
99% cov

More...

CA265_RS13875: erythronolide synthase
is similar to:
PaperBLAST

ERG10_CANAL / A0A1D8PH52: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Ergosterol biosynthesis protein 10; EC 2.3.1.9 from Candida albicans

25% id,
56% cov

ER10B_GIBZE / I1RY81: Acetyl-CoA acetyltransferase ERG10, cytosolic; Acetoacetyl-CoA thiolase ERG10; ACAT; Cytosolic thiolase ERG10; CT; Ergosterol biosynthesis protein 10; EC 2.3.1.9 from Gibberella zeae

47% id,
11% cov

CA265_RS18755: beta-ketoacyl-[acyl-carrier-protein] synthase II
is similar to:
PaperBLAST

B1YB71: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Pyrobaculum neutrophilum

27% id,
52% cov

CA265_RS09880: beta-ketoacyl-[acyl-carrier-protein] synthase II
is similar to:
PaperBLAST

AACT1_ARATH / Q9FIK7: Acetyl-CoA acetyltransferase 1; Acetoacetyl-CoA thiolase 1; Thiolase 1; EC 2.3.1.9 from Arabidopsis thaliana
Q9FIK7: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Arabidopsis thaliana

34% id,
28% cov

A0A0M4F9H9: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Euphorbia helioscopia

33% id,
28% cov

B1YB71: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Pyrobaculum neutrophilum

27% id,
27% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1629788-1630972 (frame -2) on NZ_CP021237
is similar to:
PaperBLAST

A0A1S6KJS1: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Ginkgo biloba
Also see hits to annotated proteins above

60% id,
98% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory