Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 107 curated entries in PaperBLAST's database that match '2.4.1.13' as complete word(s).

These curated entries have 69 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS02990: mannosyltransferase is similar to:	PaperBLAST
AAA33514.1: Sucrose synthase 2 (Sus1) (EC 2.4.1.13)	24% id, 31% cov
SUS_NITEU / Q820M5: Sucrose synthase; SuSyNe; EC 2.4.1.13 from Nitrosomonas europaea CAD85125.1: sucrose synthase (Ss2;SuSyNe;NE1214) (EC 2.4.1.13) Q820M5: sucrose synthase (EC 2.4.1.13) from Nitrosomonas europaea	24% id, 31% cov
SUS2_ORYSJ / P30298: Sucrose synthase 2; OsSUS2; Sucrose synthase 1; RSs1; Sucrose-UDP glucosyltransferase 2; EC 2.4.1.13 from Oryza sativa AAL31375.1: sucrose synthase 1 (Os06g0194900) (EC 2.4.1.13)	25% id, 28% cov
SUS_DENA2 / D4H6M0: Sucrose synthase; SuSyDa; EC 2.4.1.13 from Denitrovibrio acetiphilus ADD69694.1: sucrose synthase (SuSyDa;Dacet_2944) (EC 2.4.1.13) D4H6M0: sucrose synthase (EC 2.4.1.13) from Denitrovibrio acetiphilus	23% id, 30% cov
SUS4_ORYSJ / Q10LP5: Sucrose synthase 4; OsSUS4; Sucrose-UDP glucosyltransferase 4; EC 2.4.1.13 from Oryza sativa	25% id, 28% cov
CAA26229.1: sucrose synthase 1 (SH-1) (EC 2.4.1.13)	25% id, 28% cov
AAF85966.1: sucrose synthase-2 (Susy2) (EC 2.4.1.13)	25% id, 28% cov
CAA03935.1: Sucrose synthase type 2 (EC 2.4.1.13)	29% id, 24% cov
SUS2_HORVU / P31923: Sucrose synthase 2; Sucrose-UDP glucosyltransferase 2; EC 2.4.1.13 from Hordeum vulgare CAA49551.1: Sucrose synthase 2 (EC 2.4.1.13)	29% id, 24% cov
SUS_MELRP / I7A3T6: Sucrose synthase; SuSyMr; EC 2.4.1.13 from Melioribacter roseus AFN74551.1: sucrose synthase (SuSyMr;MROS_1314) (EC 2.4.1.13) I7A3T6: sucrose synthase (EC 2.4.1.13) from Melioribacter roseus	29% id, 24% cov
AAL50571.1: sucrose synthase (Sus2;BoSuS2) (EC 2.4.1.13)	25% id, 27% cov
E0Z1D0: sucrose synthase (EC 2.4.1.13) from Solanum lycopersicum	23% id, 29% cov
Q84T18: sucrose synthase (EC 2.4.1.13) from Solanum tuberosum	25% id, 27% cov
E0Z1D1: sucrose synthase (EC 2.4.1.13) from Solanum lycopersicum	25% id, 26% cov
BAA88981.1: sucrose synthase (CitSUSA-2) (EC 2.4.1.13)	23% id, 28% cov
BAA88904.1: sucrose synthase (CitSUSA) (EC 2.4.1.13) Q9SLY2: sucrose synthase (EC 2.4.1.13) from Citrus unshiu	23% id, 28% cov
AAM95944.1: sucrose synthase (Sus) (EC 2.4.1.13)	23% id, 28% cov
AAC41682.1: sucrose synthase 3 (SS3;Os07g0616800) (EC 2.4.1.13)	28% id, 23% cov
SUS3_ORYSJ / Q43009: Sucrose synthase 3; OsSUS3; RSs3; Sucrose-UDP glucosyltransferase 3; EC 2.4.1.13 from Oryza sativa Q43009: sucrose synthase (EC 2.4.1.13) from Oryza sativa	28% id, 23% cov
CAA76057.1: sucrose synthase isoform II (SusyDc2) (EC 2.4.1.13) O49845: sucrose synthase (EC 2.4.1.13) from Daucus carota*	23% id, 28% cov
CAA04512.1: sucrose synthase 2 (Sus2) (EC 2.4.1.13) O24301: sucrose synthase (EC 2.4.1.13) from Pisum sativum	24% id, 26% cov
SUS1_HORVU / P31922: Sucrose synthase 1; Sucrose-UDP glucosyltransferase 1; EC 2.4.1.13 from Hordeum vulgare CAA46701.1: sucrose synthase 1 (Ss1) (EC 2.4.1.13) P31922: sucrose synthase (EC 2.4.1.13) from Hordeum vulgare	25% id, 23% cov
Q0E7D4: sucrose synthase (EC 2.4.1.13) from Coffea arabica	23% id, 24% cov
CAB38022.1: sucrose synthase (Ss2) (EC 2.4.1.13)	24% id, 23% cov
AAR19769.1: sucrose synthase (SBSS2) (EC 2.4.1.13)	22% id, 24% cov
P49037: sucrose synthase (EC 2.4.1.13) from Solanum lycopersicum	23% id, 23% cov
CAD61188.1: sucrose synthase 4 (Sus4) (EC 2.4.1.13) Q7Y078: sucrose synthase (EC 2.4.1.13) from Solanum tuberosum	23% id, 23% cov
AAA33841.1: sucrose synthase (Sus1;SuSy;SS16) (EC 2.4.1.13)	22% id, 23% cov
AAM95943.1: sucrose synthase (Sus1) (EC 2.4.1.13)	23% id, 23% cov
CAA65640.1: sucrose synthase (EC 2.4.1.13)	25% id, 20% cov
AAK65960.1: sucrose synthase (SS1;SBSS1) (EC 2.4.1.13)	25% id, 19% cov
CAA53081.1: sucrose synthase isoform I (Susy*Dc1) (EC 2.4.1.13)	24% id, 18% cov
Q00P16: sucrose synthase (EC 2.4.1.13) from Eucalyptus grandis	26% id, 17% cov
SUS6_ARATH / Q9FX32: Sucrose synthase 6; AtSUS6; Sucrose-UDP glucosyltransferase 6; EC 2.4.1.13 from Arabidopsis thaliana SUS6 / Q9FX32: sucrose synthase (EC 2.4.1.13) from Arabidopsis thaliana Q9FX32: sucrose synthase (EC 2.4.1.13) from Arabidopsis thaliana	26% id, 16% cov
Q00P15: sucrose synthase (EC 2.4.1.13) from Eucalyptus grandis	26% id, 16% cov
SUS_ACICK / A0A059ZV61: Sucrose synthase; SuSyAc; EC 2.4.1.13 from Acidithiobacillus caldus AIA55343.1: sucrose synthase (SuSyAc;Acaty_c1477) (EC 2.4.1.13) A0A059ZV61: sucrose synthase (EC 2.4.1.13) from Acidithiobacillus caldus	34% id, 12% cov
CAA57881.1: sucrose synthase (Css1) (EC 2.4.1.13)	22% id, 18% cov
More...

CA265_RS01805: hypothetical protein is similar to:	PaperBLAST
CAB40794.1: sucrose synthase S1 (MtSucS1;SucS1) (EC 2.4.1.13)	22% id, 32% cov
AAC17867.1: sucrose synthase (MsSUS1) (EC 2.4.1.13)	22% id, 32% cov
P31926: sucrose synthase (EC 2.4.1.13) from Vicia faba	25% id, 25% cov
AAC28107.1: nodule-enhanced sucrose synthase (Ness) (EC 2.4.1.13) O81610: sucrose synthase (EC 2.4.1.13) from Pisum sativum	24% id, 25% cov
Q9T0M9: sucrose synthase (EC 2.4.1.13) from Pisum sativum	24% id, 25% cov
SUS_NITEU / Q820M5: Sucrose synthase; SuSyNe; EC 2.4.1.13 from Nitrosomonas europaea CAD85125.1: sucrose synthase (Ss2;SuSyNe;NE1214) (EC 2.4.1.13) Q820M5: sucrose synthase (EC 2.4.1.13) from Nitrosomonas europaea	27% id, 21% cov
BAA08304.1: sucrose-phosphate synthase (Sps1) (EC 2.4.1.13)	33% id, 10% cov
More...

CA265_RS19230: hypothetical protein is similar to:	PaperBLAST
SUS_MELRP / I7A3T6: Sucrose synthase; SuSyMr; EC 2.4.1.13 from Melioribacter roseus AFN74551.1: sucrose synthase (SuSyMr;MROS_1314) (EC 2.4.1.13) I7A3T6: sucrose synthase (EC 2.4.1.13) from Melioribacter roseus	22% id, 31% cov
AAF85966.1: sucrose synthase-2 (Susy2) (EC 2.4.1.13)	26% id, 18% cov
CAA26229.1: sucrose synthase 1 (SH-1) (EC 2.4.1.13)	25% id, 18% cov
SUS_THEVB / Q8DK23: Sucrose synthase; SuSyTe; EC 2.4.1.13 from Thermosynechococcus vestitus BAC08600.1: ADP-Glc: sucrose synthase (SusA;Te-SuS;Tlr1047) (EC 2.4.1.13)	24% id, 18% cov
AAL50571.1: sucrose synthase (Sus2;BoSuS2) (EC 2.4.1.13)	24% id, 18% cov
SUS_DENA2 / D4H6M0: Sucrose synthase; SuSyDa; EC 2.4.1.13 from Denitrovibrio acetiphilus ADD69694.1: sucrose synthase (SuSyDa;Dacet_2944) (EC 2.4.1.13) D4H6M0: sucrose synthase (EC 2.4.1.13) from Denitrovibrio acetiphilus	23% id, 17% cov
BAC91548.1: sucrose synthase (SusA;SpsA;Gv-SuS;gvip490;gll3607) (EC 2.4.1.13)	31% id, 12% cov
BAB10337.1: At5g49190/K21P3.6 (sucrose synthase;Sus2) (EC 2.4.1.13)	23% id, 16% cov
SUS2_ARATH / Q00917: Sucrose synthase 2; AtSUS2; Sucrose-UDP glucosyltransferase 2; EC 2.4.1.13 from Arabidopsis thaliana Q00917: sucrose synthase (EC 2.4.1.13) from Arabidopsis thaliana	23% id, 16% cov
BAA08304.1: sucrose-phosphate synthase (Sps1) (EC 2.4.1.13)	32% id, 12% cov
CAA09297.1: sucrose synthase II (SS-II;SusA) (EC 2.4.1.13)	29% id, 12% cov
SUS_NITEU / Q820M5: Sucrose synthase; SuSyNe; EC 2.4.1.13 from Nitrosomonas europaea CAD85125.1: sucrose synthase (Ss2;SuSyNe;NE1214) (EC 2.4.1.13) Q820M5: sucrose synthase (EC 2.4.1.13) from Nitrosomonas europaea	25% id, 13% cov
CAB38022.1: sucrose synthase (Ss2) (EC 2.4.1.13)	26% id, 13% cov
SUS6_ARATH / Q9FX32: Sucrose synthase 6; AtSUS6; Sucrose-UDP glucosyltransferase 6; EC 2.4.1.13 from Arabidopsis thaliana SUS6 / Q9FX32: sucrose synthase (EC 2.4.1.13) from Arabidopsis thaliana Q9FX32: sucrose synthase (EC 2.4.1.13) from Arabidopsis thaliana	27% id, 11% cov
F8SM21: sucrose synthase (EC 2.4.1.13) from Hordeum vulgare	22% id, 11% cov
More...

CA265_RS07950: hypothetical protein is similar to:	PaperBLAST
SUS_MELRP / I7A3T6: Sucrose synthase; SuSyMr; EC 2.4.1.13 from Melioribacter roseus AFN74551.1: sucrose synthase (SuSyMr;MROS_1314) (EC 2.4.1.13) I7A3T6: sucrose synthase (EC 2.4.1.13) from Melioribacter roseus	23% id, 28% cov
BAC91548.1: sucrose synthase (SusA;SpsA;Gv-SuS;gvip490;gll3607) (EC 2.4.1.13)	25% id, 22% cov

CA265_RS23790: glycosyl transferase family 1 is similar to:	PaperBLAST
CAA65640.1: sucrose synthase (EC 2.4.1.13)	21% id, 26% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory