Curated BLAST for Genomes

 

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 7 curated entries in PaperBLAST's database that match '2.4.1.64' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS24655: family 65 glycosyl hydrolase
is similar to:
PaperBLAST

TREP_THEBR / Q8L164: Alpha,alpha-trehalose phosphorylase; TPase; EC 2.4.1.64 from Thermoanaerobacter brockii
BAB97299.1: trehalose phosphorylase (TreP) (EC 2.4.1.64)
Q8L164: alpha,alpha-trehalose phosphorylase (EC 2.4.1.64) from Thermoanaerobacter brockii

36% id,
95% cov

D6XSD4: alpha,alpha-trehalose phosphorylase (EC 2.4.1.64) from Salisediminibacterium selenitireducens

34% id,
95% cov

TREP_GEOSE / Q8GRC3: Alpha,alpha-trehalose phosphorylase; TPase; EC 2.4.1.64 from Geobacillus stearothermophilus
BAC20640.1: trehalose phosphorylase (TPase) (EC 2.4.1.64)
treP / Q8GRC3: trehalose phosphorylase subunit (EC 2.4.1.64) from Geobacillus stearothermophilus

32% id,
100% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory