Curated BLAST for Genomes

 

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 19 curated entries in PaperBLAST's database that match '2.5.1.48' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS06375: cystathionine gamma-synthase
is similar to:		 PaperBLAST

METB_HELPX / Q1M0P5: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Helicobacter pylori
Q1M0P5: cystathionine gamma-synthase (EC 2.5.1.48) from Helicobacter pylori

 53% id,
99% cov

H7C6A2: cystathionine gamma-synthase (EC 2.5.1.48) from Corynebacterium glutamicum

 52% id,
97% cov

METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis

 51% id,
96% cov

More...

CA265_RS13080: O-succinylhomoserine sulfhydrylase
is similar to:		 PaperBLAST

metZ / P55218: O-succinyl-L-homoserine sulfhydrylase (EC 2.5.1.48) from Pseudomonas aeruginosa

 48% id,
96% cov

H7C6A2: cystathionine gamma-synthase (EC 2.5.1.48) from Corynebacterium glutamicum

 39% id,
98% cov

METB_HELPX / Q1M0P5: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Helicobacter pylori
Q1M0P5: cystathionine gamma-synthase (EC 2.5.1.48) from Helicobacter pylori

 40% id,
94% cov

More...

CA265_RS08190: cystathionine gamma-synthase
is similar to:		 PaperBLAST

METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis

 46% id,
97% cov

H7C6A2: cystathionine gamma-synthase (EC 2.5.1.48) from Corynebacterium glutamicum

 45% id,
97% cov

A0PKT3: cystathionine gamma-synthase (EC 2.5.1.48) from Mycobacterium ulcerans

 44% id,
96% cov

More...

CA265_RS08180: O-acetylhomoserine aminocarboxypropyltransferase
is similar to:		 PaperBLAST

Ac3H11_2452: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Acidovorax sp.

 34% id,
100% cov

HSERO_RS16440: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Herbaspirillum seropedicae

 34% id,
98% cov

H7C6A2: cystathionine gamma-synthase (EC 2.5.1.48) from Corynebacterium glutamicum

 41% id,
54% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory