Curated BLAST for Genomes

 

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 51 curated entries in PaperBLAST's database that match '2.6.1.11'.

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 11 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS15205: aspartate aminotransferase family protein
is similar to:		 PaperBLAST

lysJ / Q4JAP8: [amino group carrier protein]-C-terminal-L-glutamyl-γ-L-lysine aminotransferase (EC 2.6.1.118; EC 2.6.1.124) from Sulfolobus acidocaldarius

 37% id,
97% cov

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus
lysJ / Q93R93: L-2-aminoadipate semialdehyde transaminase monomer (EC 2.6.1.118) from Thermus thermophilus
Q93R93: [amino group carrier protein]-gamma-(L-lysyl)-L-glutamate aminotransferase (EC 2.6.1.118) from Thermus thermophilus

 38% id,
93% cov

2ordA / Q9X2A5: Crystal structure of acetylornithine aminotransferase (ec 2.6.1.11) (acoat) (tm1785) from thermotoga maritima at 1.40 a resolution

 36% id,
95% cov

More...

CA265_RS18530: aspartate aminotransferase family protein
is similar to:		 PaperBLAST

lysJ / Q4JAP8: [amino group carrier protein]-C-terminal-L-glutamyl-γ-L-lysine aminotransferase (EC 2.6.1.118; EC 2.6.1.124) from Sulfolobus acidocaldarius

 35% id,
99% cov

2ordA / Q9X2A5: Crystal structure of acetylornithine aminotransferase (ec 2.6.1.11) (acoat) (tm1785) from thermotoga maritima at 1.40 a resolution

 35% id,
98% cov

HP15_3042: acetylornithine aminotransferase (EC 2.6.1.11); succinylornithine aminotransferase (EC 2.6.1.81) from Marinobacter adhaerens

 35% id,
97% cov

More...

CA265_RS08140: methionine aminotransferase
is similar to:		 PaperBLAST

CCBL1 / Q16773: kynurenine aminotransferase I subunit (EC 2.6.1.117; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64) from Homo sapiens

 33% id,
97% cov

101251438 / A0A3Q7IS73: 2-oxo-4-methylthiobutanoate-glutamine aminotransferase monomer (EC 2.6.1.117) from Solanum lycopersicum

 36% id,
84% cov

A0A1D6I5Q5: L-glutamine-4-(methylsulfanyl)-2-oxobutanoate aminotransferase (EC 2.6.1.117) from Zea mays

 36% id,
74% cov

More...

CA265_RS14455: L-lysine 6-transaminase
is similar to:		 PaperBLAST

2ordA / Q9X2A5: Crystal structure of acetylornithine aminotransferase (ec 2.6.1.11) (acoat) (tm1785) from thermotoga maritima at 1.40 a resolution

 30% id,
95% cov

lysJ / Q4JAP8: [amino group carrier protein]-C-terminal-L-glutamyl-γ-L-lysine aminotransferase (EC 2.6.1.118; EC 2.6.1.124) from Sulfolobus acidocaldarius

 29% id,
93% cov

ARGD_SALTY / P40732: Acetylornithine/succinyldiaminopimelate aminotransferase; ACOAT; DapATase; Succinyldiaminopimelate transferase; EC 2.6.1.11; EC 2.6.1.17 from Salmonella typhimurium

 30% id,
90% cov

More...

CA265_RS07530: adenosylmethionine--8-amino-7-oxononanoate transaminase
is similar to:		 PaperBLAST

GabT / b2662: 4-aminobutyrate aminotransferase GabT (EC 2.6.1.19; EC 2.6.1.48; EC 2.6.1.11) from Escherichia coli
gabT / P22256: 4-aminobutyrate aminotransferase GabT (EC 2.6.1.19; EC 2.6.1.48; EC 2.6.1.11) from Escherichia coli

 31% id,
91% cov

AZOBR_RS19025: acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] from Azospirillum brasilense

 28% id,
99% cov

ARGD_SALTY / P40732: Acetylornithine/succinyldiaminopimelate aminotransferase; ACOAT; DapATase; Succinyldiaminopimelate transferase; EC 2.6.1.11; EC 2.6.1.17 from Salmonella typhimurium

 31% id,
90% cov

More...

CA265_RS15950: glutamate-1-semialdehyde-2,1-aminomutase
is similar to:		 PaperBLAST

lysJ / Q4JAP8: [amino group carrier protein]-C-terminal-L-glutamyl-γ-L-lysine aminotransferase (EC 2.6.1.118; EC 2.6.1.124) from Sulfolobus acidocaldarius

 34% id,
83% cov

KAT_CLOAI / B0VH76: 3-aminobutyryl-CoA aminotransferase; HemL-like protein; EC 2.6.1.111 from Cloacimonas acidaminovorans
B0VH76: 3-aminobutanoyl-CoA transaminase (EC 2.6.1.111) from Candidatus Cloacimonas

 27% id,
99% cov

ARGD_SALTY / P40732: Acetylornithine/succinyldiaminopimelate aminotransferase; ACOAT; DapATase; Succinyldiaminopimelate transferase; EC 2.6.1.11; EC 2.6.1.17 from Salmonella typhimurium

 31% id,
85% cov

More...

CA265_RS01760: aminotransferase DegT
is similar to:		 PaperBLAST

SPNR_SACSN / Q9ALN9: dTDP-4-dehydro-2,3,6-trideoxy-D-glucose 4-aminotransferase; dTDP-4-keto-2,3,6-trideoxy-D-glucose 4-aminotransferase; EC 2.6.1.110 from Saccharopolyspora spinosa
spnR / Q9ALN9: dTDP-4-amino-2,3,4,6-tetradeoxy-D-glucose:2-oxoglutarate aminotransferase subunit (EC 2.6.1.110) from Saccharopolyspora spinosa
Q9ALN9: dTDP-4-dehydro-2,3,6-trideoxy-D-glucose 4-aminotransferase (EC 2.6.1.110) from Saccharopolyspora spinosa

 29% id,
94% cov

CA265_RS07515: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

MTNE_BACSU / O31665: L-glutamine--4-(methylsulfanyl)-2-oxobutanoate aminotransferase; GTK; Glutamine transaminase MtnE; EC 2.6.1.117 from Bacillus subtilis
mtnE / O31665: L-glutamine:4-(methylsulfanyl)-2-oxobutanoate aminotransferase (EC 2.6.1.117; EC 2.6.1.88) from Bacillus subtilis
O31665: L-glutamine-4-(methylsulfanyl)-2-oxobutanoate aminotransferase (EC 2.6.1.117) from Bacillus subtilis

 29% id,
92% cov

CCBL1 / Q16773: kynurenine aminotransferase I subunit (EC 2.6.1.117; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64) from Homo sapiens

 24% id,
92% cov

101251438 / A0A3Q7IS73: 2-oxo-4-methylthiobutanoate-glutamine aminotransferase monomer (EC 2.6.1.117) from Solanum lycopersicum

 26% id,
79% cov

More...

CA265_RS11675: aspartate aminotransferase
is similar to:		 PaperBLAST

CCBL1 / Q16773: kynurenine aminotransferase I subunit (EC 2.6.1.117; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64) from Homo sapiens

 29% id,
91% cov

101251438 / A0A3Q7IS73: 2-oxo-4-methylthiobutanoate-glutamine aminotransferase monomer (EC 2.6.1.117) from Solanum lycopersicum

 29% id,
86% cov

CA265_RS19295: transcriptional regulator
is similar to:		 PaperBLAST

SPNR_SACSN / Q9ALN9: dTDP-4-dehydro-2,3,6-trideoxy-D-glucose 4-aminotransferase; dTDP-4-keto-2,3,6-trideoxy-D-glucose 4-aminotransferase; EC 2.6.1.110 from Saccharopolyspora spinosa
spnR / Q9ALN9: dTDP-4-amino-2,3,4,6-tetradeoxy-D-glucose:2-oxoglutarate aminotransferase subunit (EC 2.6.1.110) from Saccharopolyspora spinosa
Q9ALN9: dTDP-4-dehydro-2,3,6-trideoxy-D-glucose 4-aminotransferase (EC 2.6.1.110) from Saccharopolyspora spinosa

 26% id,
89% cov

CA265_RS03770: hypothetical protein
is similar to:		 PaperBLAST

SPNR_SACSN / Q9ALN9: dTDP-4-dehydro-2,3,6-trideoxy-D-glucose 4-aminotransferase; dTDP-4-keto-2,3,6-trideoxy-D-glucose 4-aminotransferase; EC 2.6.1.110 from Saccharopolyspora spinosa
spnR / Q9ALN9: dTDP-4-amino-2,3,4,6-tetradeoxy-D-glucose:2-oxoglutarate aminotransferase subunit (EC 2.6.1.110) from Saccharopolyspora spinosa
Q9ALN9: dTDP-4-dehydro-2,3,6-trideoxy-D-glucose 4-aminotransferase (EC 2.6.1.110) from Saccharopolyspora spinosa

 25% id,
42% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory