Curated BLAST for Genomes

 

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 16 curated entries in PaperBLAST's database that match '2.7.1.12' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS25410: gluconate kinase
is similar to:
PaperBLAST

BPHYT_RS16720: Gluconokinase (EC 2.7.1.12) from Burkholderia phytofirmans

46% id,
96% cov

Q8NMT0: gluconokinase (EC 2.7.1.12) from Corynebacterium glutamicum

46% id,
90% cov

GntK / b3437: D-gluconate kinase, thermostable (EC 2.7.1.12) from Escherichia coli
gntK: gluconokinase; EC 2.7.1.12 from Escherichia coli
gntK / P46859: D-gluconate kinase, thermostable (EC 2.7.1.12) from Escherichia coli

45% id,
92% cov

More...

CA265_RS14580: cytidylate kinase
is similar to:
PaperBLAST

Q8NMT0: gluconokinase (EC 2.7.1.12) from Corynebacterium glutamicum

32% id,
34% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory