Curated BLAST for Genomes

 

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 114 curated entries in PaperBLAST's database that match '2.7.1.13'.

These curated entries have 82 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS16510: tetraacyldisaccharide 4'-kinase
is similar to:
PaperBLAST

O67572: tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) from Aquifex aeolicus

33% id,
97% cov

LPXK_ECOLI / P27300: Tetraacyldisaccharide 4'-kinase; Lipid A 4'-kinase; EC 2.7.1.130 from Escherichia coli
YcaH / b0915: tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) from Escherichia coli
lpxK / P27300: tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) from Escherichia coli
P27300: tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) from Escherichia coli

27% id,
91% cov

LPXK_ARATH / Q8LEA0: Probable tetraacyldisaccharide 4'-kinase, mitochondrial; Protein LIPID X 4'-kinase; AtLpxK; EC 2.7.1.130 from Arabidopsis thaliana

28% id,
82% cov

CA265_RS19865: carbohydrate kinase
is similar to:
PaperBLAST

Q4KD57: 2-ketogluconokinase (EC 2.7.1.13) from Pseudomonas fluorescens

24% id,
94% cov

CA265_RS18205: hypothetical protein
is similar to:
PaperBLAST

Q0K080: dehydrogluconokinase (EC 2.7.1.13); 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Cupriavidus necator

26% id,
46% cov

CA265_RS22350: diacylglycerol kinase
is similar to:
PaperBLAST

AGK_HUMAN / Q53H12: Acylglycerol kinase, mitochondrial; hAGK; Multiple substrate lipid kinase; HsMuLK; MuLK; Multi-substrate lipid kinase; EC 2.7.1.107; EC 2.7.1.138; EC 2.7.1.94 from Homo sapiens

38% id,
16% cov

CA265_RS20355: hypothetical protein
is similar to:
PaperBLAST

P54675: phosphatidylinositol 3-kinase (EC 2.7.1.137) from Dictyostelium discoideum

22% id,
9% cov

P54674: phosphatidylinositol 3-kinase (EC 2.7.1.137) from Dictyostelium discoideum

34% id,
4% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory