Curated BLAST for Genomes

 

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 9 curated entries in PaperBLAST's database that match '2.7.1.16' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS08625: ribulokinase
is similar to:
PaperBLAST

CA265_RS08625: Ribulokinase (EC 2.7.1.16) from Pedobacter sp.

100% id,
100% cov

Echvi_0515: Ribulokinase (EC 2.7.1.16) from Echinicola vietnamensis

57% id,
98% cov

ARAB_ECOLI / P08204: Ribulokinase; EC 2.7.1.16 from Escherichia coli
AraB / b0063: ribulokinase (EC 2.7.1.16) from Escherichia coli
araB: ribulokinase; EC 2.7.1.16 from Escherichia coli
araB / P08204: ribulokinase (EC 2.7.1.16) from Escherichia coli

50% id,
95% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory