Curated BLAST for Genomes

 

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 29 curated entries in PaperBLAST's database that match '2.7.1.30' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS07870: glycerol kinase
is similar to:
PaperBLAST

GLPK_THETH / O66131: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Thermus thermophilus

61% id,
99% cov

GLPK_ECOLI / P0A6F3: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Escherichia coli
GlpK / b3926: glycerol kinase (EC 2.7.1.30) from Escherichia coli
glpK: glycerol kinase; EC 2.7.1.30 from Escherichia coli
glpK / P0A6F3: glycerol kinase (EC 2.7.1.30) from Escherichia coli

62% id,
98% cov

GLPK_THEAQ / Q9WX53: Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Thermus aquaticus

61% id,
99% cov

More...

CA265_RS19710: carbohydrate kinase
is similar to:
PaperBLAST

Q0IID9: glycerol kinase (EC 2.7.1.30) from Bos taurus

24% id,
91% cov

GLPK_MOUSE / Q64516: Glycerol kinase; GK; Glycerokinase; ATP:glycerol 3-phosphotransferase; EC 2.7.1.30 from Mus musculus

24% id,
91% cov

CA265_RS08625: ribulokinase
is similar to:
PaperBLAST

Dshi_3420: Glycerol kinase (EC 2.7.1.30) from Dinoroseobacter shibae

25% id,
70% cov

B0M0V1: glycerol kinase (EC 2.7.1.30) from Bombyx mori

24% id,
41% cov

GLPK2_MOUSE / Q9WU65: Glycerol kinase 2; GK 2; Glycerokinase 2; ATP:glycerol 3-phosphotransferase 2; Glycerol kinase, testis specific 2; EC 2.7.1.30 from Mus musculus

27% id,
32% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory