Curated BLAST for Genomes

 

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 46 curated entries in PaperBLAST's database that match '2.7.1.4' as complete word(s).

These curated entries have 39 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS18205: hypothetical protein
is similar to:
PaperBLAST

Echvi_2804: Fructokinase (EC 2.7.1.4) from Echinicola vietnamensis

40% id,
96% cov

C4M2I2: fructokinase (EC 2.7.1.4) from Entamoeba histolytica

38% id,
96% cov

G4T023: fructokinase (EC 2.7.1.4) from Methylomicrobium alcaliphilum

28% id,
94% cov

More...

CA265_RS23280: sugar kinase
is similar to:
PaperBLAST

MAK_ECOLI / P23917: Fructokinase; D-fructose kinase; Manno(fructo)kinase; EC 2.7.1.4 from Escherichia coli
Mak / b0394: fructokinase (EC 2.7.1.7; EC 2.7.1.4) from Escherichia coli
mak / P23917: fructokinase (EC 2.7.1.7; EC 2.7.1.4) from Escherichia coli

24% id,
97% cov

SCRK_BACSU / O05510: Putative fructokinase; Glucomannan utilization protein E; EC 2.7.1.4 from Bacillus subtilis
O05510: fructokinase (EC 2.7.1.4) from Bacillus subtilis

26% id,
77% cov

CA265_RS11300: sugar kinase
is similar to:
PaperBLAST

SCRK_BACSU / O05510: Putative fructokinase; Glucomannan utilization protein E; EC 2.7.1.4 from Bacillus subtilis
O05510: fructokinase (EC 2.7.1.4) from Bacillus subtilis

23% id,
96% cov

Ga0059261_1776: Fructokinase (EC 2.7.1.4) from Sphingomonas koreensis

23% id,
86% cov

CA265_RS19865: carbohydrate kinase
is similar to:
PaperBLAST

frk / GB|AAB52373.1: fructokinase; EC 2.7.1.4 from Rhizobium leguminosarum

25% id,
48% cov

CA265_RS09800: chromosome partitioning protein ParA
is similar to:
PaperBLAST

HXK1 / P04806: hexokinase 1 (EC 2.7.1.4; EC 2.7.1.1; EC 2.7.1.7) from Saccharomyces cerevisiae

23% id,
49% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory