Curated BLAST for Genomes

 

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 10 curated entries in PaperBLAST's database that match '2.7.1.5' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS02640: carbohydrate kinase
is similar to:
PaperBLAST

Echvi_1574: Rhamnulokinase (EC 2.7.1.5) from Echinicola vietnamensis

47% id,
98% cov

rhaK / Q7BSH0: rhamnulokinase (EC 2.7.1.5) from Rhizobium leguminosarum

30% id,
96% cov

SMc03003: Rhamnulokinase RhaK in alpha-proteobacteria (EC 2.7.1.5) from Sinorhizobium meliloti

32% id,
66% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory