Curated BLAST for Genomes

 

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 21 curated entries in PaperBLAST's database that match '2.7.1.6' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS06125: galactokinase
is similar to:
PaperBLAST

CA265_RS06125: galactokinase, -1-phosphate forming (EC 2.7.1.6) from Pedobacter sp.

100% id,
100% cov

GAL1_PYRHO / O58107: Galactokinase; Galactose kinase; EC 2.7.1.6 from Pyrococcus horikoshii

39% id,
100% cov

GAL1_PYRFU / Q9HHB6: Galactokinase; Galactose kinase; EC 2.7.1.6 from Pyrococcus furiosus

38% id,
99% cov

More...

CA265_RS09565: galactokinase
is similar to:
PaperBLAST

CA265_RS06125: galactokinase, -1-phosphate forming (EC 2.7.1.6) from Pedobacter sp.

38% id,
94% cov

GAL1_PYRFU / Q9HHB6: Galactokinase; Galactose kinase; EC 2.7.1.6 from Pyrococcus furiosus

37% id,
97% cov

GAL1_PYRHO / O58107: Galactokinase; Galactose kinase; EC 2.7.1.6 from Pyrococcus horikoshii

36% id,
98% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory