Curated BLAST for Genomes

 

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 38 curated entries in PaperBLAST's database that match '2.7.6.1'.

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS24735: ribose-phosphate pyrophosphokinase
is similar to:		 PaperBLAST

E7EAU9: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Bacillus amyloliquefaciens

 52% id,
97% cov

KPRS_BACSU / P14193: Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PPRibP synthase; PRPP synthase; PRPPase; EC 2.7.6.1 from Bacillus subtilis

 50% id,
97% cov

KPRS_ECOLI / P0A717: Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1 from Escherichia coli
DnaR / b1207: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Escherichia coli
prs / P0A717: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Escherichia coli
P0A719: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Escherichia coli

 49% id,
99% cov

More...

CA265_RS03655: phosphoribosylpyrophosphate synthetase
is similar to:		 PaperBLAST

KPRS_MYCGE / P47304: Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1 from Mycoplasma genitalium

 29% id,
77% cov

KPRS_SALTY / P0A1V6: Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1 from Salmonella typhimurium

 27% id,
81% cov

KPRS2_STRP6 / Q5XC85: Putative ribose-phosphate pyrophosphokinase 2; RPPK 2; 5-phospho-D-ribosyl alpha-1-diphosphate synthase 2; Phosphoribosyl diphosphate synthase 2; Phosphoribosyl pyrophosphate synthase 2; P-Rib-PP synthase 2; PRPP synthase 2; PRPPase 2; EC 2.7.6.1 from Streptococcus pyogenes

 26% id,
82% cov

More...

CA265_RS19150: amidophosphoribosyltransferase
is similar to:		 PaperBLAST

Q97Z86: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Saccharolobus solfataricus

 23% id,
65% cov

KPRS_THEVO / Q97CA5: Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1 from Thermoplasma volcanium
Q97CA5: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Thermoplasma volcanium

 22% id,
49% cov

KPRS_THEKO / O52958: Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1 from Thermococcus kodakarensis

 32% id,
28% cov

CA265_RS12760: orotate phosphoribosyltransferase
is similar to:		 PaperBLAST

Q5SHU3: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Thermus thermophilus

 31% id,
40% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory