Curated BLAST for Genomes

 

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 31 curated entries in PaperBLAST's database that match '3.1.2.6' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS19735: MBL fold hydrolase
is similar to:
PaperBLAST

GLO22_ECOLI / P75849: Hydroxyacylglutathione hydrolase GloC; Accessory type II glyoxalase; Glyoxalase II 2; GlxII-2; EC 3.1.2.6 from Escherichia coli
GloC / b0927: hydroxyacylglutathione hydrolase GloC (EC 3.1.2.6) from Escherichia coli
gloC / P75849: hydroxyacylglutathione hydrolase GloC (EC 3.1.2.6) from Escherichia coli

36% id,
93% cov

A0A0D1GCF8: hydroxyacylglutathione hydrolase (EC 3.1.2.6) from Staphylococcus aureus

30% id,
99% cov

CA265_RS25095: MBL fold metallo-hydrolase
is similar to:
PaperBLAST

GLO22_SCHPO / O94250: Probable hydroxyacylglutathione hydrolase C13B11.03c; Glyoxalase II; Glx II; EC 3.1.2.6 from Schizosaccharomyces pombe

29% id,
81% cov

GLO2_YEAST / Q05584: Hydroxyacylglutathione hydrolase, cytoplasmic isozyme; Glyoxalase II; Glx II; EC 3.1.2.6 from Saccharomyces cerevisiae
GLO2 / Q05584: glyoxalase II (cytoplasmic) (EC 3.1.2.6) from Saccharomyces cerevisiae

31% id,
76% cov

GLO21_SCHPO / Q9UT36: Probable hydroxyacylglutathione hydrolase C824.07; Glyoxalase II; Glx II; EC 3.1.2.6 from Schizosaccharomyces pombe

29% id,
73% cov

More...

CA265_RS09730: subclass B3 metallo-beta-lactamase
is similar to:
PaperBLAST

A0A0D1GCF8: hydroxyacylglutathione hydrolase (EC 3.1.2.6) from Staphylococcus aureus

32% id,
65% cov

GLO22_ECOLI / P75849: Hydroxyacylglutathione hydrolase GloC; Accessory type II glyoxalase; Glyoxalase II 2; GlxII-2; EC 3.1.2.6 from Escherichia coli
GloC / b0927: hydroxyacylglutathione hydrolase GloC (EC 3.1.2.6) from Escherichia coli
gloC / P75849: hydroxyacylglutathione hydrolase GloC (EC 3.1.2.6) from Escherichia coli

34% id,
48% cov

CA265_RS13165: MBL fold metallo-hydrolase
is similar to:
PaperBLAST

GLO2N_ARATH / Q9SID3: Hydroxyacylglutathione hydrolase 2, mitochondrial; Glyoxalase II; Glx II; EC 3.1.2.6 from Arabidopsis thaliana

27% id,
75% cov

GLO2M_ARATH / O24495: Hydroxyacylglutathione hydrolase 1, mitochondrial; Glyoxalase II; Glx II; EC 3.1.2.6 from Arabidopsis thaliana

22% id,
69% cov

Q940L0: hydroxyacylglutathione hydrolase (EC 3.1.2.6) from Oryza sativa

26% id,
53% cov

More...

CA265_RS04805: XynC protein
is similar to:
PaperBLAST

YeiG / b2154: S-formylglutathione hydrolase / S-lactoylglutathione hydrolase (EC 3.1.2.12; EC 3.1.2.6) from Escherichia coli
yeiG / P33018: S-formylglutathione hydrolase / S-lactoylglutathione hydrolase (EC 3.1.2.12; EC 3.1.2.6) from Escherichia coli

23% id,
84% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory