Curated BLAST for Genomes

 

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 143 curated entries in PaperBLAST's database that match '3.1.3.3'.

These curated entries have 115 distinct sequences.

Running ublast with E ≤ 0.01

Found 15 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS18040: 5'-nucleotidase, lipoprotein e(P4) family
is similar to:
PaperBLAST

O08351: nucleotidase (EC 3.1.3.31) from Elizabethkingia meningoseptica

44% id,
96% cov

CA265_RS10200: HAD family hydrolase
is similar to:
PaperBLAST

ARAL_BACSU / P94526: Sugar-phosphatase AraL; Arabinose operon protein AraL; Phosphoserine phosphatase; EC 3.1.3.23; EC 3.1.3.3 from Bacillus subtilis

31% id,
91% cov

CA265_RS21005: peptidase M41
is similar to:
PaperBLAST

D4GUJ7: nucleotidase (EC 3.1.3.31); proteasome ATPase (EC 5.6.1.5) from Haloferax volcanii

44% id,
63% cov

CA265_RS05220: fructose-bisphosphatase class I
is similar to:
PaperBLAST

A8DUA7: sedoheptulose-bisphosphatase (EC 3.1.3.37) from Morus alba

31% id,
78% cov

P46284: sedoheptulose-bisphosphatase (EC 3.1.3.37) from Chlamydomonas reinhardtii

30% id,
77% cov

CA265_RS22635: phosphoserine phosphatase
is similar to:
PaperBLAST

Q99LS3: phosphoserine phosphatase (EC 3.1.3.3) from Mus musculus

27% id,
90% cov

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis

47% id,
52% cov

SERB_HUMAN / P78330: Phosphoserine phosphatase; PSP; PSPase; L-3-phosphoserine phosphatase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Homo sapiens
PSPH / P78330: L-3-phosphoserine phosphatase (EC 3.1.3.3) from Homo sapiens

25% id,
95% cov

More...

CA265_RS08205: histidine phosphatase family protein
is similar to:
PaperBLAST

PSPB_HYDTT / D3DFP8: Putative phosphoserine phosphatase 2; PSP 2; PSPase 2; Metal-independent phosphoserine phosphatase 2; iPSP2; O-phosphoserine phosphohydrolase 2; EC 3.1.3.3 from Hydrogenobacter thermophilus
D3DFP8: phosphoserine phosphatase (EC 3.1.3.3) from Hydrogenobacter thermophilus

25% id,
98% cov

CA265_RS19470: noncanonical pyrimidine nucleotidase, YjjG family
is similar to:
PaperBLAST

PSP_BACSU / P94512: Phosphoserine phosphatase; PSP; EC 3.1.3.3 from Bacillus subtilis

27% id,
83% cov

CA265_RS07060: AAA family ATPase
is similar to:
PaperBLAST

D4GUJ7: nucleotidase (EC 3.1.3.31); proteasome ATPase (EC 5.6.1.5) from Haloferax volcanii

28% id,
64% cov

CA265_RS02595: alkaline phosphatase
is similar to:
PaperBLAST

PsiA / b0383: alkaline phosphatase (EC 3.1.3.1; EC 3.1.3.75; EC 3.1.3.41; EC 3.1.3.74; EC 3.1.3.99; EC 3.1.3.5; EC 3.1.3.6; EC 3.1.3.89; EC 3.1.3.91; EC 3.1.3.60; EC 3.1.3.15; EC 3.1.3.102; EC 3.1.3.108; EC 3.1.3.11; EC 3.1.3.20; EC 3.1.3.19; EC 3.1.3.3; EC 3.6.1.25; EC 3.6.1.1; EC 3.1.3.23; EC 3.1.3.38; EC 3.1.3.18; EC 3.1.3.68; EC 3.9.1.1) from Escherichia coli
phoA / P00634: alkaline phosphatase (EC 3.1.3.1; EC 3.1.3.75; EC 3.1.3.41; EC 3.1.3.74; EC 3.1.3.99; EC 3.1.3.5; EC 3.1.3.6; EC 3.1.3.89; EC 3.1.3.91; EC 3.1.3.60; EC 3.1.3.15; EC 3.1.3.102; EC 3.1.3.11; EC 3.1.3.20; EC 3.1.3.19; EC 3.1.3.3; EC 3.6.1.25; EC 3.6.1.1; EC 3.1.3.58; EC 3.1.3.23; EC 3.1.3.38; EC 3.1.3.18; EC 3.1.3.68; EC 3.9.1.1) from Escherichia coli

27% id,
66% cov

PsiA / b0383: alkaline phosphatase (EC 3.1.3.1; EC 3.1.3.75; EC 3.1.3.41; EC 3.1.3.74; EC 3.1.3.99; EC 3.1.3.5; EC 3.1.3.6; EC 3.1.3.89; EC 3.1.3.91; EC 3.1.3.60; EC 3.1.3.15; EC 3.1.3.102; EC 3.1.3.108; EC 3.1.3.11; EC 3.1.3.20; EC 3.1.3.19; EC 3.1.3.3; EC 3.6.1.25; EC 3.6.1.1; EC 3.1.3.23; EC 3.1.3.38; EC 3.1.3.18; EC 3.1.3.68; EC 3.9.1.1) from Escherichia coli
phoA / P00634: alkaline phosphatase (EC 3.1.3.1; EC 3.1.3.75; EC 3.1.3.41; EC 3.1.3.74; EC 3.1.3.99; EC 3.1.3.5; EC 3.1.3.6; EC 3.1.3.89; EC 3.1.3.91; EC 3.1.3.60; EC 3.1.3.15; EC 3.1.3.102; EC 3.1.3.11; EC 3.1.3.20; EC 3.1.3.19; EC 3.1.3.3; EC 3.6.1.25; EC 3.6.1.1; EC 3.1.3.58; EC 3.1.3.23; EC 3.1.3.38; EC 3.1.3.18; EC 3.1.3.68; EC 3.9.1.1) from Escherichia coli

30% id,
53% cov

CA265_RS09010: 3-phosphoglycerate dehydrogenase
is similar to:
PaperBLAST

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis

35% id,
49% cov

CA265_RS12240: phosphoglycerate dehydrogenase
is similar to:
PaperBLAST

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis

31% id,
49% cov

CA265_RS23175: phosphoglycerate dehydrogenase
is similar to:
PaperBLAST

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis

29% id,
49% cov

CA265_RS10420: hydroxyacid dehydrogenase
is similar to:
PaperBLAST

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis

26% id,
41% cov

CA265_RS00220: potassium-transporting ATPase subunit B
is similar to:
PaperBLAST

SERB_YEAST / P42941: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Saccharomyces cerevisiae

30% id,
31% cov

CA265_RS03670: O-acetyl-ADP-ribose deacetylase
is similar to:
PaperBLAST

POLN_EEEVF / Q4QXJ8: Polyprotein P1234; P1234; Non-structural polyprotein; EC 2.1.1.-; EC 2.7.7.-; EC 3.1.3.33; EC 3.4.22.-; EC 3.6.1.15; EC 3.6.4.13; EC 3.1.3.84; EC 2.7.7.19; EC 2.7.7.48 from Eastern equine

34% id,
5% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory