Curated BLAST for Genomes

 

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 52 curated entries in PaperBLAST's database that match '3.5.1.1' as complete word(s).

These curated entries have 43 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS25090: L-asparaginase 1
is similar to:
PaperBLAST

CA265_RS25090: L-asparaginase (EC 3.5.1.1) from Pedobacter sp.

100% id,
100% cov

ASPG1_ECOLI / P0A962: L-asparaginase 1; L-asparaginase I; L-ASNase I; L-asparagine amidohydrolase I; EC 3.5.1.1 from Escherichia coli
AnsA / b1767: L-asparaginase 1 (EC 3.5.1.38; EC 3.5.1.1) from Escherichia coli

43% id,
99% cov

ASPG_PYRFU / Q8TZE8: L-asparaginase; EC 3.5.1.1 from Pyrococcus furiosus
Q8TZE8: asparaginase (EC 3.5.1.1) from Pyrococcus furiosus

35% id,
99% cov

More...

CA265_RS15565: beta-aspartyl-peptidase
is similar to:
PaperBLAST

P37595: beta-aspartyl-peptidase (EC 3.4.19.5); asparaginase (EC 3.5.1.1) from Escherichia coli

52% id,
97% cov

Q5JHT1: asparaginase (EC 3.5.1.1) from Thermococcus kodakarensis

45% id,
94% cov

Q8GXG1: asparaginase (EC 3.5.1.1) from Arabidopsis thaliana

43% id,
99% cov

More...

CA265_RS19530: asparaginase
is similar to:
PaperBLAST

P37595: beta-aspartyl-peptidase (EC 3.4.19.5); asparaginase (EC 3.5.1.1) from Escherichia coli

38% id,
88% cov

Q5JHT1: asparaginase (EC 3.5.1.1) from Thermococcus kodakarensis

35% id,
95% cov

CCNA_00096: asparaginase (EC 3.5.1.1) from Caulobacter crescentus

34% id,
90% cov

More...

CA265_RS08130: glycosylasparaginase
is similar to:
PaperBLAST

Q5JHT1: asparaginase (EC 3.5.1.1) from Thermococcus kodakarensis

35% id,
93% cov

ASGL1_MOUSE / Q8C0M9: Isoaspartyl peptidase/L-asparaginase; Asparaginase-like protein 1; Beta-aspartyl-peptidase; Isoaspartyl dipeptidase; L-asparagine amidohydrolase; EC 3.4.19.5; EC 3.5.1.1 from Mus musculus

36% id,
87% cov

ASGL1_RAT / Q8VI04: Isoaspartyl peptidase/L-asparaginase; Asparaginase-like protein 1; Asparaginase-like sperm autoantigen; Beta-aspartyl-peptidase; Glial asparaginase; Isoaspartyl dipeptidase; L-asparagine amidohydrolase; EC 3.4.19.5; EC 3.5.1.1 from Rattus norvegicus

39% id,
75% cov

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CA265_RS02335: hypothetical protein
is similar to:
PaperBLAST

ASPG_DIRIM / Q9U518: L-asparaginase; DiAsp; L-asparagine amidohydrolase; EC 3.5.1.1 from Dirofilaria immitis

25% id,
43% cov

ASPG_DIRIM / Q9U518: L-asparaginase; DiAsp; L-asparagine amidohydrolase; EC 3.5.1.1 from Dirofilaria immitis

29% id,
29% cov

H0W0T5: asparaginase (EC 3.5.1.1) from Cavia porcellus

27% id,
25% cov

More...

CA265_RS12375: hypothetical protein
is similar to:
PaperBLAST

ASPG_DIRIM / Q9U518: L-asparaginase; DiAsp; L-asparagine amidohydrolase; EC 3.5.1.1 from Dirofilaria immitis

31% id,
25% cov

H0W0T5: asparaginase (EC 3.5.1.1) from Cavia porcellus

34% id,
22% cov

LPP60_RAT / O88202: 60 kDa lysophospholipase; Lysophospholipase-transacylase; EC 3.1.1.5; EC 3.5.1.1; EC 3.1.1.47 from Rattus norvegicus

32% id,
20% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory