Curated BLAST for Genomes

 

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 4 curated entries in PaperBLAST's database that match '3.5.1.20' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS10475: amidinotransferase
is similar to:
PaperBLAST

ctlX / A0A0N9VZU6: citrullinase (EC 3.5.1.20) from Pseudomonas fluorescens

51% id,
98% cov

CA265_RS15465: acyltransferase
is similar to:
PaperBLAST

CTU_FRATT / Q5NHL7: Citrullinase; Citrulline ureidase; CTU; EC 3.5.1.20 from Francisella tularensis
ctu / Q5NHL7: citrullinase (EC 3.5.1.20) from Francisella tularensis
Q5NHL7: citrullinase (EC 3.5.1.20) from Francisella tularensis

40% id,
100% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory