Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 37 curated entries in PaperBLAST's database that match '3.5.1.25' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS18930: N-acetylglucosamine-6-phosphate deacetylase is similar to:	PaperBLAST
BAA22834.1: N-acetylglucosamine 6-phosphate deacetylase (NagA) (EC 3.5.1.25)	37% id, 98% cov
NAGA_VIBCH / O32445: N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; EC 3.5.1.25 from Vibrio cholerae nagA / O32445: N-acetylglucosamine-6-phosphate deacetylase subunit (EC 3.5.1.25) from Vibrio cholerae	37% id, 98% cov
NAGA_ECO57 / P0AF19: N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; EC 3.5.1.25 from Escherichia coli NAGA_ECOLI / P0AF18: N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; EC 3.5.1.25 from Escherichia coli NagA / b0677: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Escherichia coli AAG54999.1: EDL933_0745 (EC 3.5.1.25) AAC73771.1: N-acetylglucosamine 6-phosphate deacetylase (NagA;b0677) (EC 3.5.1.25) BAB34130.1: ECs0707 (EC 3.5.1.25) nagA / P0AF18: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Escherichia coli	36% id, 99% cov
AAN79225.1: c0752 (NagA) (EC 3.5.1.25)	36% id, 99% cov
Q8Y5F6: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Listeria monocytogenes	33% id, 99% cov
CCNA_00452: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Caulobacter crescentus	33% id, 99% cov
BPHYT_RS02730: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Burkholderia phytofirmans	37% id, 87% cov
nagA / A3CQ16: N-acetylglucosamine-6-phosphate deacetylase subunit (EC 3.5.1.25) from Streptococcus sanguinis	32% id, 99% cov
PS417_22985: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Pseudomonas simiae	33% id, 93% cov
AGAA2_SHESA / A0KYQ5: N-acetylgalactosamine-6-phosphate deacetylase; GalNAc-6-P deacetylase; N-acetylglucosamine-6-phosphate deacetylase; GlcNAc-6-P deacetylase; EC 3.5.1.-; EC 3.5.1.25 from Shewanella sp. agaA^II / A0KYQ5: N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella sp.	33% id, 94% cov
Shew_1117: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella loihica	31% id, 99% cov
SO3505: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella oneidensis	32% id, 96% cov
Shewana3_3112: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella sp.	33% id, 92% cov
Sama_0946: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella amazonensis	32% id, 93% cov
A0A3E2N0G4: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Mycobacterium marinum	34% id, 87% cov
NAGA_BACSU / O34450: N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; EC 3.5.1.25 from Bacillus subtilis CAB15506.1: N-acetylglucosamine 6-phosphate deacetylase (NagA;BSU35010) (EC 3.5.1.25)	31% id, 96% cov
PfGW456L13_4830: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Pseudomonas fluorescens	34% id, 87% cov
AO353_04450: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Pseudomonas fluorescens	34% id, 87% cov
NAGA_HUMAN / Q9Y303: N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; Amidohydrolase domain-containing protein 2; EC 3.5.1.25 from Homo sapiens	34% id, 86% cov
AO356_17550: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Pseudomonas fluorescens	33% id, 87% cov
NAGA_LYSSH / Q84F86: N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; EC 3.5.1.25 from Lysinibacillus sphaericus	33% id, 87% cov
Q8DN83: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Streptococcus pneumoniae	29% id, 98% cov
NAGA_MOUSE / Q8JZV7: N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; Amidohydrolase domain-containing protein 2; EC 3.5.1.25 from Mus musculus	33% id, 86% cov
Ga0059261_1645: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Sphingomonas koreensis	30% id, 93% cov
Q8Y8E8: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Listeria monocytogenes	29% id, 96% cov
agaA / Q8XAC3: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Escherichia coli	27% id, 97% cov
AAC44683.1: N-acetylglucosamine 6-phosphate deacetylase (EC 3.5.1.25)	29% id, 91% cov
More...

CA265_RS11820: hypothetical protein is similar to:	PaperBLAST
nagA / A3CQ16: N-acetylglucosamine-6-phosphate deacetylase subunit (EC 3.5.1.25) from Streptococcus sanguinis	25% id, 93% cov

CA265_RS03390: dihydroorotase is similar to:	PaperBLAST
NAGA_LYSSH / Q84F86: N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; EC 3.5.1.25 from Lysinibacillus sphaericus	30% id, 29% cov

CA265_RS22880: amidohydrolase is similar to:	PaperBLAST
agaA / Q8XAC3: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Escherichia coli	28% id, 24% cov
Q8DN83: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Streptococcus pneumoniae	34% id, 16% cov
Sama_0946: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella amazonensis	35% id, 14% cov

CA265_RS07780: amidohydrolase is similar to:	PaperBLAST
Sama_0946: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella amazonensis	48% id, 11% cov

CA265_RS22875: amidohydrolase is similar to:	PaperBLAST
NAGA_MOUSE / Q8JZV7: N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; Amidohydrolase domain-containing protein 2; EC 3.5.1.25 from Mus musculus	35% id, 14% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory