Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)
Found 8 curated entries in PaperBLAST's database that match '3.5.1.30' as complete word(s).
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query
| CA265_RS08135: amidohydrolase is similar to: | PaperBLAST |
PfGW456L13_1170: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens | 33% id, 95% cov |
Pf1N1B4_2504: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens | 32% id, 95% cov |
AO353_07425: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens | 31% id, 95% cov |
| CA265_RS15465: acyltransferase is similar to: | PaperBLAST |
Pf6N2E2_4777: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens | 30% id, 95% cov |
AO356_14225: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens | 29% id, 95% cov |
davA / Q88QV2: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas putida | 30% id, 91% cov |
| CA265_RS07705: carbon-nitrogen hydrolase is similar to: | PaperBLAST |
PfGW456L13_1170: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens | 30% id, 88% cov |
Pf1N1B4_2504: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens | 30% id, 88% cov |
AO356_14225: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens | 30% id, 89% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory