Curated BLAST for Genomes

 

Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 16 curated entries in PaperBLAST's database that match '3.5.3.6' as complete word(s).

These curated entries have 15 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS10470: amidinotransferase
is similar to:
PaperBLAST

A0A3G2YMH7: arginine deiminase (EC 3.5.3.6) from Enterococcus faecalis

29% id,
99% cov

arcA / GI|14349116: arginine deiminase; EC 3.5.3.6 from Enterococcus faecalis

28% id,
99% cov

P13981: arginine deiminase (EC 3.5.3.6) from Pseudomonas aeruginosa

30% id,
88% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory