Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)
Found 22 curated entries in PaperBLAST's database that match '4.1.1.18' as complete word(s).
These curated entries have 13 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query
| CA265_RS04075: decarboxylase is similar to: | PaperBLAST |
desA / Q9L072: L-lysine decarboxylase (EC 4.1.1.18) from Streptomyces coelicolor | 50% id, 98% cov |
bibA / B6EP92: L-lysine decarboxylase (EC 4.1.1.18) from Aliivibrio salmonicida | 42% id, 93% cov |
| CA265_RS10665: Rossman fold protein, TIGR00730 family is similar to: | PaperBLAST |
A0A2Z4EVE5: lysine decarboxylase (EC 4.1.1.18) from Morus alba | 40% id, 87% cov |
| CA265_RS09650: diaminopimelate decarboxylase is similar to: | PaperBLAST |
A0A0H3H393: lysine decarboxylase (EC 4.1.1.18) from Klebsiella oxytoca | 32% id, 92% cov |
ldc / O50657: L-lysine decarboxylase monomer (EC 4.1.1.18) from Selenomonas ruminantium | 24% id, 91% cov |
| CA265_RS04970: Rossman fold protein, TIGR00730 family is similar to: | PaperBLAST |
A0A2Z4EVE5: lysine decarboxylase (EC 4.1.1.18) from Morus alba | 27% id, 81% cov |
| CA265_RS23450: aspartate aminotransferase family protein is similar to: | PaperBLAST |
desA / Q9L072: L-lysine decarboxylase (EC 4.1.1.18) from Streptomyces coelicolor | 27% id, 80% cov |
bibA / B6EP92: L-lysine decarboxylase (EC 4.1.1.18) from Aliivibrio salmonicida | 26% id, 74% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory