Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)
Found 15 curated entries in PaperBLAST's database that match '4.1.2.14'.
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query
| CA265_RS19860: bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase is similar to: | PaperBLAST |
CA265_RS19860: 2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14) from Pedobacter sp. | 100% id, 100% cov |
A0A0B6VQ18: 2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14) from Flavobacterium sp. | 35% id, 98% cov |
D4GV57: 2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14) from Haloferax volcanii | 29% id, 96% cov |
| CA265_RS02050: 4-hydroxy-tetrahydrodipicolinate synthase is similar to: | PaperBLAST |
KDGA_PICTO / Q6KZI8: 2-dehydro-3-deoxy-D-gluconate/2-dehydro-3-deoxy-phosphogluconate aldolase; 2-dehydro-3-deoxy-galactonate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase; EC 4.1.2.14; EC 4.1.2.51; EC 4.1.2.-; EC 4.1.2.21 from Picrophilus torridus | 32% id, 79% cov |
| CA265_RS04835: dihydrodipicolinate synthetase is similar to: | PaperBLAST |
O54288: 2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14); 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6 phosphogalactonate aldolase (EC 4.1.2.55) from Saccharolobus solfataricus | 26% id, 95% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory