Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)
Found 13 curated entries in PaperBLAST's database that match '4.2.1.25' as complete word(s).
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query
| CA265_RS15795: dihydroxy-acid dehydratase is similar to: | PaperBLAST |
BPHYT_RS19730: L-arabonate dehydratase (EC 4.2.1.25) from Burkholderia phytofirmans | 35% id, 89% cov |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 35% id, 89% cov |
SM_b20890: L-arabonate dehydratase (EC 4.2.1.25) from Sinorhizobium meliloti | 34% id, 89% cov |
| CA265_RS13665: galactonate dehydratase is similar to: | PaperBLAST |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 31% id, 93% cov |
xacD / D4GP40: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Haloferax volcanii | 32% id, 89% cov |
| CA265_RS12250: enolase is similar to: | PaperBLAST |
xacD / D4GP40: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Haloferax volcanii | 30% id, 85% cov |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 27% id, 94% cov |
| CA265_RS12920: dipeptide epimerase is similar to: | PaperBLAST |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 27% id, 88% cov |
| CA265_RS01240: hypothetical protein is similar to: | PaperBLAST |
xacD / D4GP40: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Haloferax volcanii | 23% id, 96% cov |
| CA265_RS04225: mandelate racemase is similar to: | PaperBLAST |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 24% id, 59% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory