Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)
Found 7 curated entries in PaperBLAST's database that match '4.2.1.68' as complete word(s).
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query
| CA265_RS04225: mandelate racemase is similar to: | PaperBLAST |
ENOF1_HUMAN / Q7L5Y1: Mitochondrial enolase superfamily member 1; Antisense RNA to thymidylate synthase; rTS; L-fuconate dehydratase; EC 4.2.1.68 from Homo sapiens | 41% id, 93% cov |
HSERO_RS05235: L-fuconate dehydratase (EC 4.2.1.68) from Herbaspirillum seropedicae | 40% id, 97% cov |
FUCD_XANCP / Q8P3K2: L-fuconate dehydratase; FucD; EC 4.2.1.68 from Xanthomonas campestris | 41% id, 93% cov |
| CA265_RS19875: altronate hydrolase is similar to: | PaperBLAST |
BPHYT_RS34230: L-fuconate dehydratase; L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans | 31% id, 76% cov |
| CA265_RS04670: altronate hydrolase is similar to: | PaperBLAST |
BPHYT_RS34230: L-fuconate dehydratase; L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans | 31% id, 75% cov |
| CA265_RS12250: enolase is similar to: | PaperBLAST |
HSERO_RS05235: L-fuconate dehydratase (EC 4.2.1.68) from Herbaspirillum seropedicae | 27% id, 59% cov |
FUCD_XANCP / Q8P3K2: L-fuconate dehydratase; FucD; EC 4.2.1.68 from Xanthomonas campestris | 31% id, 51% cov |
G3Y683: L-fuconate dehydratase (EC 4.2.1.68) from Aspergillus niger | 29% id, 52% cov |
| CA265_RS01240: hypothetical protein is similar to: | PaperBLAST |
FUCD_XANCP / Q8P3K2: L-fuconate dehydratase; FucD; EC 4.2.1.68 from Xanthomonas campestris | 26% id, 51% cov |
| CA265_RS12920: dipeptide epimerase is similar to: | PaperBLAST |
FUCD_XANCP / Q8P3K2: L-fuconate dehydratase; FucD; EC 4.2.1.68 from Xanthomonas campestris | 28% id, 46% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1026189-1027433 (frame -1) on NZ_CP021237 is similar to: | PaperBLAST |
ENOF1_HUMAN / Q7L5Y1: Mitochondrial enolase superfamily member 1; Antisense RNA to thymidylate synthase; rTS; L-fuconate dehydratase; EC 4.2.1.68 from Homo sapiens | 41% id, 95% cov |
Lawrence Berkeley National Laboratory