Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)
Found 4 curated entries in PaperBLAST's database that match '4.2.1.7' as complete word(s).
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query
| CA265_RS19875: altronate hydrolase is similar to: | PaperBLAST |
CA265_RS19875: Altronate dehydratase (EC 4.2.1.7) from Pedobacter sp. | 100% id, 100% cov |
UXAA_ECOLI / P42604: Altronate dehydratase; D-altronate hydro-lyase; EC 4.2.1.7 from Escherichia coli | 37% id, 73% cov |
UXAA_ECOLI / P42604: Altronate dehydratase; D-altronate hydro-lyase; EC 4.2.1.7 from Escherichia coli | 31% id, 33% cov |
| CA265_RS04670: altronate hydrolase is similar to: | PaperBLAST |
CA265_RS19875: Altronate dehydratase (EC 4.2.1.7) from Pedobacter sp. | 70% id, 100% cov |
UXAA_ECOLI / P42604: Altronate dehydratase; D-altronate hydro-lyase; EC 4.2.1.7 from Escherichia coli | 35% id, 71% cov |
UXAA_ECOLI / P42604: Altronate dehydratase; D-altronate hydro-lyase; EC 4.2.1.7 from Escherichia coli | 34% id, 26% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory