Curated BLAST for Genomes


Curated BLAST

Searching in Pedobacter sp. GW460-11-11-14-LB5 (Pedo557)

Found 20 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pedobacter sp. GW460-11-11-14-LB5, or try another query

CA265_RS11630: prephenate dehydratase
is similar to:

AROD5_ARATH / Q9FNJ8: Arogenate dehydratase 5, chloroplastic; AtADT5; EC from Arabidopsis thaliana
Q9FNJ8: arogenate dehydratase (EC from Arabidopsis thaliana

38% id,
68% cov

AROD4_ARATH / O22241: Arogenate dehydratase 4, chloroplastic; AtADT4; EC from Arabidopsis thaliana
O22241: arogenate dehydratase (EC from Arabidopsis thaliana

37% id,
68% cov

AROD1_ARATH / Q9SA96: Arogenate dehydratase/prephenate dehydratase 1, chloroplastic; AtADT1; AtPDT1; EC; EC from Arabidopsis thaliana
Q9SA96: arogenate dehydratase (EC from Arabidopsis thaliana

34% id,
72% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory